PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP013657.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WRKY

Protein Properties

Length: 571aa MW: 62682.5 Da PI: 7.6986

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP013657.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	106.3	1.5e-33	231	288	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDg+nWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers d++++ei+Y+g+Hnh+k PCP013657.1 231 DDGFNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSL-DGQITEIVYKGNHNHPK 288 8**************************************.*************85 PP
2	WRKY	105.5	2.7e-33	403	461	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct +gCpv+k+ver+++d ++v++tYeg+Hnh+ PCP013657.1 403 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCPVRKHVERASHDLRAVITTYEGKHNHD 461 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 571 aa Download sequence
MASSSGSLET SANSHPAAFT FSTHPFMTNS FSDLLEAGTD EYSNPPRYIG QGGLSDRIAE 60 RTGSGVPKFK SLPPPSLPIS PPSISPSSYF AIPPGLSPAE LLDSPVLLNA SNILPSPTTG 120 SFAARGAFNW KNNQQNVKQE SKNHSDFSFQ TQARPPISSS SSMFQSSNTS IQTTQEQACN 180 NNYFPAQELP KQEYGSVQTL SSELTTKTLQ SNAPANGGFN QQSQTLSRKS DDGFNWRKYG 240 QKQVKGSENP RSYYKCTYPN CPTKKKVERS LDGQITEIVY KGNHNHPKPQ NPRRSSSNSH 300 AIHAFNPTNT NEIPDQTYAN HGNSQMDSIG TPEHSSISIG DDDFEQSSQR SKSGGGEEFD 360 EDEPNAKRWK NEADRNEGIS APGSRTVREP RVVVQTTSDI DILDDGYRWR KYGQKVVKGN 420 PNPRSYYKCT NPGCPVRKHV ERASHDLRAV ITTYEGKHNH DVPAARGSSS HAAVNRPIPN 480 NNNNVASAMR PITHHTNNSA NTNSLQNLRQ PTSEGHAPFS LEMLQSPGSY GFVGFDGNSM 540 GSYMNQTQLS DIFSKAKEEP RDDAFFESLL C

Sequence ? help Back to Top

Protein Sequence Length: 571 aa Download sequence

MASSSGSLET SANSHPAAFT FSTHPFMTNS FSDLLEAGTD EYSNPPRYIG QGGLSDRIAE  60
RTGSGVPKFK SLPPPSLPIS PPSISPSSYF AIPPGLSPAE LLDSPVLLNA SNILPSPTTG  120
SFAARGAFNW KNNQQNVKQE SKNHSDFSFQ TQARPPISSS SSMFQSSNTS IQTTQEQACN  180
NNYFPAQELP KQEYGSVQTL SSELTTKTLQ SNAPANGGFN QQSQTLSRKS DDGFNWRKYG  240
QKQVKGSENP RSYYKCTYPN CPTKKKVERS LDGQITEIVY KGNHNHPKPQ NPRRSSSNSH  300
AIHAFNPTNT NEIPDQTYAN HGNSQMDSIG TPEHSSISIG DDDFEQSSQR SKSGGGEEFD  360
EDEPNAKRWK NEADRNEGIS APGSRTVREP RVVVQTTSDI DILDDGYRWR KYGQKVVKGN  420
PNPRSYYKCT NPGCPVRKHV ERASHDLRAV ITTYEGKHNH DVPAARGSSS HAAVNRPIPN  480
NNNNVASAMR PITHHTNNSA NTNSLQNLRQ PTSEGHAPFS LEMLQSPGSY GFVGFDGNSM  540
GSYMNQTQLS DIFSKAKEEP RDDAFFESLL C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-112	WRKY family protein