PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP013632.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

ERF

Protein Properties

Length: 582aa MW: 64146.4 Da PI: 9.5572

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP013632.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	35.7	2.2e-11	379	427	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+ykGV +grW A+I++ ++ ++lg+f ++eA +a++ a+++++g PCP013632.1 379 SKYKGVV-PQANGRWGAQIYEK-----HQCVWLGTFNEEDEATRAYDIAAQRFRG 427 79**7.7779*****3.....5******99***********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 582 aa Download sequence
MDFWPEFLAS SWGREFVAGG VGGMAGVVSG YPLDTLRVLQ QSSPSGSAFS ILRNVVCAEG 60 PIALYRGMAA PMAAVTFQNA MVFQVYAILS RTCDPSVSAK DPPSYKGVAL GGFGTGAIQS 120 LLLSPVELVK IRLQLQRDAK SKPHQLQSHN GPVDVAKSIM RAEGLRGMYR GLFITVLREA 180 PSYGLYFWTY EYIREKLHPG CRKTGEESLQ TMLVAGGLAG VASWICCYPL DVVKTRLQAQ 240 APSQYLPPRY SGIADCFRKS VREDGYGVLW RGLGTAVSRA FLVNGAIFAA YEIALRPAPS 300 EIIGQAPSQS TPAEQIGWHP AQAGDDEEAG SSERRRRREK EEGKKKKGSG ASSVILNPEL 360 SSSGDTGGVE AESQKLPSSK YKGVVPQANG RWGAQIYEKH QCVWLGTFNE EDEATRAYDI 420 AAQRFRGRDA VTNFKPSFVE KLCLTTQLEN QGRKWEKWEE ELDVKVPRKC GLFCLKVSHL 480 SLDSAVARYC PLWAYHSITV LFLGTQEQWV THPGNVLART RLTSEFRWNP KAVSPQKASC 540 YMEALVPKLC KKEVKNGDFR CLGGSGRFRR VPRRSGRVPQ QV

Sequence ? help Back to Top

Protein Sequence Length: 582 aa Download sequence

MDFWPEFLAS SWGREFVAGG VGGMAGVVSG YPLDTLRVLQ QSSPSGSAFS ILRNVVCAEG  60
PIALYRGMAA PMAAVTFQNA MVFQVYAILS RTCDPSVSAK DPPSYKGVAL GGFGTGAIQS  120
LLLSPVELVK IRLQLQRDAK SKPHQLQSHN GPVDVAKSIM RAEGLRGMYR GLFITVLREA  180
PSYGLYFWTY EYIREKLHPG CRKTGEESLQ TMLVAGGLAG VASWICCYPL DVVKTRLQAQ  240
APSQYLPPRY SGIADCFRKS VREDGYGVLW RGLGTAVSRA FLVNGAIFAA YEIALRPAPS  300
EIIGQAPSQS TPAEQIGWHP AQAGDDEEAG SSERRRRREK EEGKKKKGSG ASSVILNPEL  360
SSSGDTGGVE AESQKLPSSK YKGVVPQANG RWGAQIYEKH QCVWLGTFNE EDEATRAYDI  420
AAQRFRGRDA VTNFKPSFVE KLCLTTQLEN QGRKWEKWEE ELDVKVPRKC GLFCLKVSHL  480
SLDSAVARYC PLWAYHSITV LFLGTQEQWV THPGNVLART RLTSEFRWNP KAVSPQKASC  540
YMEALVPKLC KKEVKNGDFR CLGGSGRFRR VPRRSGRVPQ QV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	333	339	ERRRRRE
2	334	340	RRRRREK
3	334	347	RRRRREKEEGKKKK
4	335	341	RRRRREK
5	338	347	REKEEGKKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G25730.1	1e-35	RAV family protein