PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP013431.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 586aa MW: 65924.5 Da PI: 9.5256

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP013431.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	52.5	1.6e-16	21	82	67	127
NAM 67 kyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127 k++ ++++ ratk+g+Wk tgk+k+v+++ k++++g k++L+f +g ++++ktdWvmhey PCP013431.1 21 KKTAKNQTVRATKEGFWKITGKQKPVKTEdKRTVIGEKRILTFNQGCVRDSQKTDWVMHEYY 82 566788999****************99666779************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 586 aa Download sequence
MQGFHSSTRI IKNGTSSALT KKTAKNQTVR ATKEGFWKIT GKQKPVKTED KRTVIGEKRI 60 LTFNQGCVRD SQKTDWVMHE YYIPQTNPNV NQGDLVLCCV RKKSGEKVDA ANCHELESST 120 NNNASDFGNQ QLLAPRMDIE EEHTPQQQSM DIFERAKRRM LSNDYHEKVT SSTTPLCQSI 180 RRVSSEDEAL SSDTDTQETS LQMLSEPPVD SSHPRRQDVV MLYQKRAASP VNVVPNQLVT 240 DELSGTRRQL VNDKHSGTHQ RTSRLQRESR HSNALNVKNA SSVDVDAELP QINRSQLAPE 300 EYHNKERTRR RTYPTSALEA PSKQKELKQQ QSKVKEAAEP RAAVDFPPKK TSITESNKEA 360 EVAQGNNAKK GFSLGSGTWY QSDRSGKTTT QEIQTLATIA MGDKPDKSTS SSTTLYQKWE 420 NPNHPHYLHQ SNQPGSILVQ QPLVEDNYVR GNTLLLEPLP TVNKAYALVL RHEKQMERAA 480 SRNQKMSCLL APSMDGRVTH SNFAANTRQR LKLNKTEQSR LSKGDQVMAH DKKDAMPNFP 540 FSQEDCKQIL QLLNKSKSSF ANKVGNSSNH EELSGPTLGE DDWDGN

Sequence ? help Back to Top

Protein Sequence Length: 586 aa Download sequence

MQGFHSSTRI IKNGTSSALT KKTAKNQTVR ATKEGFWKIT GKQKPVKTED KRTVIGEKRI  60
LTFNQGCVRD SQKTDWVMHE YYIPQTNPNV NQGDLVLCCV RKKSGEKVDA ANCHELESST  120
NNNASDFGNQ QLLAPRMDIE EEHTPQQQSM DIFERAKRRM LSNDYHEKVT SSTTPLCQSI  180
RRVSSEDEAL SSDTDTQETS LQMLSEPPVD SSHPRRQDVV MLYQKRAASP VNVVPNQLVT  240
DELSGTRRQL VNDKHSGTHQ RTSRLQRESR HSNALNVKNA SSVDVDAELP QINRSQLAPE  300
EYHNKERTRR RTYPTSALEA PSKQKELKQQ QSKVKEAAEP RAAVDFPPKK TSITESNKEA  360
EVAQGNNAKK GFSLGSGTWY QSDRSGKTTT QEIQTLATIA MGDKPDKSTS SSTTLYQKWE  420
NPNHPHYLHQ SNQPGSILVQ QPLVEDNYVR GNTLLLEPLP TVNKAYALVL RHEKQMERAA  480
SRNQKMSCLL APSMDGRVTH SNFAANTRQR LKLNKTEQSR LSKGDQVMAH DKKDAMPNFP  540
FSQEDCKQIL QLLNKSKSSF ANKVGNSSNH EELSGPTLGE DDWDGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G33060.1	1e-12	NAC family protein