PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP013057.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WRKY

Protein Properties

Length: 528aa MW: 57192.9 Da PI: 7.4027

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP013057.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	108.6	2.9e-34	243	299	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgynWrKYGqK+vkgsefprsYY+Ct+++Cpvkkkvers d++++ei+Y+geHnhe PCP013057.1 243 DDGYNWRKYGQKQVKGSEFPRSYYKCTHPNCPVKKKVERSV-DGQITEIIYKGEHNHE 299 8**************************************.*************8 PP
2	WRKY	106.8	1.1e-33	417	475	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct++ C+v+k++er+++dpk+v++tYeg+Hnh+ PCP013057.1 417 LDDGYRWRKYGQKVVKGNPYPRSYYKCTFPACNVRKHIERASTDPKAVITTYEGKHNHD 475 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 528 aa Download sequence
MTDNQEQPPG PPPPGSSQPS KPAATHDPPR PTITLPSRTS FESIFSSGAG GNTGPGLGLG 60 FSPGPMTLVS NFFSDGDDCK SFSQLLAGAM TSPSPGEPGF PQLEKRNSGD NDGGSEFRFK 120 QNRPPPMFSV PTPSGFLDSP GIFSPGQGPF GMTHQQALAQ VTAQAAALSP SFFNFSAEFS 180 TSFSTAPATS LTHPPSLTSD TMPPQEIPSG TPDSAVATKE SSDIALSDQI SQPSSFAVDK 240 PNDDGYNWRK YGQKQVKGSE FPRSYYKCTH PNCPVKKKVE RSVDGQITEI IYKGEHNHER 300 PQSKRGKDPN ANSQANSDMA LQVHGGNSNK SKEGTGPYSM SKKRQESSQA THDNLSGTSD 360 SEEVGGAETR VDEKDEDQPD TKRRNTEVRS ELAPASAHRT VTEPRIIVQT TSEVDLLDDG 420 YRWRKYGQKV VKGNPYPRSY YKCTFPACNV RKHIERASTD PKAVITTYEG KHNHDVPASK 480 TSSHYTGNNN ASNLRPVNPG TGKMDKIDLR NKDQQPIASL RLKEEQIT

Sequence ? help Back to Top

Protein Sequence Length: 528 aa Download sequence

MTDNQEQPPG PPPPGSSQPS KPAATHDPPR PTITLPSRTS FESIFSSGAG GNTGPGLGLG  60
FSPGPMTLVS NFFSDGDDCK SFSQLLAGAM TSPSPGEPGF PQLEKRNSGD NDGGSEFRFK  120
QNRPPPMFSV PTPSGFLDSP GIFSPGQGPF GMTHQQALAQ VTAQAAALSP SFFNFSAEFS  180
TSFSTAPATS LTHPPSLTSD TMPPQEIPSG TPDSAVATKE SSDIALSDQI SQPSSFAVDK  240
PNDDGYNWRK YGQKQVKGSE FPRSYYKCTH PNCPVKKKVE RSVDGQITEI IYKGEHNHER  300
PQSKRGKDPN ANSQANSDMA LQVHGGNSNK SKEGTGPYSM SKKRQESSQA THDNLSGTSD  360
SEEVGGAETR VDEKDEDQPD TKRRNTEVRS ELAPASAHRT VTEPRIIVQT TSEVDLLDDG  420
YRWRKYGQKV VKGNPYPRSY YKCTFPACNV RKHIERASTD PKAVITTYEG KHNHDVPASK  480
TSSHYTGNNN ASNLRPVNPG TGKMDKIDLR NKDQQPIASL RLKEEQIT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03340.1	1e-151	WRKY family protein