PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP012431.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 275aa    MW: 31237.5 Da    PI: 5.7928
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP012431.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.46.8e-0810381646
                     HHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding 16 vkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     v+++  + W+ Ia+ +  gRt++++k++w++
      PCP012431.1 10 VAEHSYR-WSVIAAQLS-GRTDNDIKNYWNT 38
                     6788888.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MCQPMATPEV AEHSYRWSVI AAQLSGRTDN DIKNYWNTKL KKKLMGMHMA SPPARHHHRN  60
LLKPPPFPSS SHHSYQNQSL IQSETLSSLY KDLSNYDRSF LGFEVPLPLP SQVSLTSNNF  120
SNTSTNSFSL FQTLNYPAGV KKNNNNNILM FGSEGSCSTS SAGSCNNQIS YDYCSRSEIN  180
NIKQEEMGFD HQSFMMLNFG NQWTEKPNGF YFEAENNTLE FTDLDEDVKQ QLISTSSKNT  240
HNNDTIINGS STSNCLLFNV DESKTEDDEK VMYFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36890.19e-15MYB family protein