PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP011735.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WOX

Protein Properties

Length: 377aa MW: 42778.8 Da PI: 7.4388

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP011735.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	69.4	4.3e-22	90	149	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql++Leel+++ +r+psae++++++++l +++ ++V++WFqN++a+e++ PCP011735.1 90 SRWNPTPEQLRALEELYRRgTRTPSAEQIQHITAQLrkygKIEGKNVFYWFQNHKARERQ 149 7***************99************************************97 PP
2	Wus_type_Homeobox	115.6	2.4e-37	89	151	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+PtpeQ++ Leely++G+rtP++e+iq+ita+L++yGkie+kNVfyWFQN+kaRerqk+ PCP011735.1 89 SSRWNPTPEQLRALEELYRRGTRTPSAEQIQHITAQLRKYGKIEGKNVFYWFQNHKARERQKR 151 79***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MWMMGYNDGG HGDFNMPDSF NGRKLRPLVP RPLPSVNNTV SSTITTPPCL NRSAIHGSHD 60 FFPQYHQLAA MAEQNKRSEF LNTPQVVVSS RWNPTPEQLR ALEELYRRGT RTPSAEQIQH 120 ITAQLRKYGK IEGKNVFYWF QNHKARERQK RRRQMESSAL SADHDQPLQI SMTSADNQKK 180 EESLGAGRTG FEVEETKNWA PFTNCSTTTL AEESVSIQRA AKARMAAAEC RADGWIQFDE 240 EELQQRRNFV ERNATWQMMQ LSCPSHPHPP THLINTPPTC ASTTTRSRAA ATGRTMDQSL 300 IKSHDLSIFI APYASETGFN IEQDHGCEES QTLQLFPLRS GHVNTNELSI SEKDHAELSA 360 SFSAHPYPFF EFLPLKN

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MWMMGYNDGG HGDFNMPDSF NGRKLRPLVP RPLPSVNNTV SSTITTPPCL NRSAIHGSHD  60
FFPQYHQLAA MAEQNKRSEF LNTPQVVVSS RWNPTPEQLR ALEELYRRGT RTPSAEQIQH  120
ITAQLRKYGK IEGKNVFYWF QNHKARERQK RRRQMESSAL SADHDQPLQI SMTSADNQKK  180
EESLGAGRTG FEVEETKNWA PFTNCSTTTL AEESVSIQRA AKARMAAAEC RADGWIQFDE  240
EELQQRRNFV ERNATWQMMQ LSCPSHPHPP THLINTPPTC ASTTTRSRAA ATGRTMDQSL  300
IKSHDLSIFI APYASETGFN IEQDHGCEES QTLQLFPLRS GHVNTNELSI SEKDHAELSA  360
SFSAHPYPFF EFLPLKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18010.1	1e-50	WOX family protein