PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP011027.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 442aa    MW: 49583.5 Da    PI: 9.5059
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP011027.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP233.51e-10108149351
          AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                   +GV++  k+ +W A I++      +k+++lg+ g+ eeAa ++++a+ 
  PCP011027.1 108 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAAHLYDRAAF 149
                  79**98..47*********4.....5********************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 442 aa     Download sequence    
MVSLRRRRLL GLGLCCEIPP VLDPLPRVVN NGTTPQNFTR TNPVSVHPMP SNHANQPDGN  60
TIVKAKPRSV TASGSSLSKE QHDVAGPTIK RRKRHRRKHA QNQEPCLMRG VYFKNMKWQA  120
AIKVDKKQIH LGTVGSQEEA AHLYDRAAFM CGREPNFELS EGEKQELRKF KWDEFLVMTR  180
HAITNKKHRR RRQGAESEKR SESPQLEDGD WEDDKEEVNG LSASEVKCSA DRPPIFWCIK  240
AHIRANGEFH GRLIRPKYEE GATKIWLPSE YPTYNPIRIR RNKDLHRNTA LPWQNDSEIL  300
ALKAEESSGE ARTRTKANFT DFITIMASDD PKAVEAEPPP SSWKERIVFP TLLAGILGGG  360
AGLFSKHRKV MGLPTSCATY AANFAIVTAC YCGAREYVGV TRKTGPDDLV NSAIAGFGTG  420
AILGRLQGEI PSICIFCMFE EE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.18e-44ERF family protein