PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP010208.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 282aa    MW: 31169.8 Da    PI: 9.2972
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP010208.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.78.4e-11556147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47
                     +++WT+ E+e l+ +v+++G+g Wk I +         +R+  ++k++w+++
      PCP010208.1  5 KQKWTAAEEEALLAGVAKHGPGKWKNIIKDPEcapflIHRSNIDLKDKWRNL 56
                     79*************************99998998*999***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MGNQKQKWTA AEEEALLAGV AKHGPGKWKN IIKDPECAPF LIHRSNIDLK DKWRNLGVNS  60
CGHGSKERPR ATKIRKVVGT QHDIVQSPAS AASVRPNASL VAVTNDALST ASDGKNAPRY  120
DAMIFEALFT MKDKDGSTIG AILNYIEQRH EVPVPANFRR VLGTRLRQLA MQGKLDKAQN  180
GYKIKKDVTL VAETPISTPD QKEVRPRKLQ NYVPMISTET VKDAADNAAY KLVDADNKSF  240
LAIQAMKEAE RVSMMAEDTD SMLLLIEEIY EQCLRGEVVA LA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17520.13e-66MYB_related family protein