PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP008920.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 104aa    MW: 11836.3 Da    PI: 9.7113
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP008920.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.85.8e-091458344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     +WT+   +l+ +a +++ ++   +W  +a+ +g ++t++++k ++
      PCP008920.1 14 SWTPKQNKLFEKALALYDKEtpeRWQNVAKAVGGNKTAEEVKKHY 58
                     7******************9************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 104 aa     Download sequence    
MASSSLRKHN SSSSWTPKQN KLFEKALALY DKETPERWQN VAKAVGGNKT AEEVKKHYDI  60
LLEDLRQIES GRVPIPNYKS SIGSSTSSIN VDEEERLLKY LKLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.25e-34MYB_related family protein