PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP008372.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 301aa MW: 31893 Da PI: 6.0472

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP008372.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.2	3.3e-09	150	194	5	54
HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 h+++Er RR+ri +++ L+el+P+ + K + a++L + ++Y+k L PCP008372.1 150 HSIAERLRRERIAERIRALQELVPSvN------KTDRAAMLDEIMDYVKFL 194 99*********************55......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence
MANNPSEPQA DDFLEQILGL PNFASGDANL AGSDGGLAGG QVSPASMMLQ LNSVDGSGHI 60 GGGVGCGGGF QGGVFPLGLS LEQGKAGFLK HEEASGSGKR FRDDIVDSRV SSVKNVFHGQ 120 PISNTIAAAP HPPAMRPRVR ARRGQATDPH SIAERLRRER IAERIRALQE LVPSVNKTDR 180 AAMLDEIMDY VKFLRLQVKV LSMSRLGGAG AVAPLVTDIP LSSVEEEGSE GGRNQPAWDK 240 WSNDGTERQV AKLMEDNVGA AMQFLQSKAL CIMPISLASA IYNTQPPDTS SVVKPEMNPP 300 S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	155	160	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02590.2	1e-103	bHLH family protein