PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP007575.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TALE

Protein Properties

Length: 617aa MW: 69206.8 Da PI: 7.0785

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP007575.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.4	1.3e-09	411	448	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gL+ +qV++WF N R + PCP007575.1 411 FEHflHPYPTDSDKLTLAKQTGLSRSQVSNWFINARVR 448 554459******************************88 PP
2	BELL	101.2	7.5e-33	281	349	4	72
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e +++ ++L+s+l+eV++rYkqy++q+q+v+ sFe vaglg+a+pY++lA ka++rhF+cLk+ai+eq+ PCP007575.1 281 ESRRQNSRLISMLDEVYRRYKQYYQQMQAVARSFEYVAGLGNAAPYANLAIKAMARHFKCLKNAITEQL 349 678899*************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 617 aa Download sequence
MAEGFEPYHV PQQSRRDKLR VLAGQTHPGC LQPGSPSPPP PHLHHALLPL SYDPTTTFIS 60 SSSGLLTCAD LDVKEEGSHH HVIDHLMGFA SNSTSSSTFR HNNHHHPYMD PQFPLTPTAA 120 VQEINPFLYP PQNLHPLRDF DHQQPPYDNQ VVVFKPEPLS LSLSSSQPTN HHSQHTQQTQ 180 NNTNNNNLQR FSSPGINYDS LNSGVSVAFV PFGPFTGYPS ILKGSRFLKP AQHLLEEFCD 240 VGSREIYTAK VLTLEDSSFF DPPIESFGDD DSQMAGGDGG ESRRQNSRLI SMLDEVYRRY 300 KQYYQQMQAV ARSFEYVAGL GNAAPYANLA IKAMARHFKC LKNAITEQLH FRSQNATHLR 360 HEKDGIPMLH TRSAYGQRSL HNSEFVEHQP VWRPQRGLPE RAVTVLRAWL FEHFLHPYPT 420 DSDKLTLAKQ TGLSRSQVSN WFINARVRLW KPMVEEIHML ETRQAQKDSQ RVDLSSNRSS 480 DDHLPSSNSI GSENPSTSTH RVQDTASKRT RRELHDHITM EATEQNVSYN NFPSHMHVGH 540 VGMNMAGASS SGVSLTLGLH QNNGNGFSDP FPINAAQRFG LGLDGSSENY AMGGFEAQNR 600 HFGRDVMGGQ FLHDFVG

Sequence ? help Back to Top

Protein Sequence Length: 617 aa Download sequence

MAEGFEPYHV PQQSRRDKLR VLAGQTHPGC LQPGSPSPPP PHLHHALLPL SYDPTTTFIS  60
SSSGLLTCAD LDVKEEGSHH HVIDHLMGFA SNSTSSSTFR HNNHHHPYMD PQFPLTPTAA  120
VQEINPFLYP PQNLHPLRDF DHQQPPYDNQ VVVFKPEPLS LSLSSSQPTN HHSQHTQQTQ  180
NNTNNNNLQR FSSPGINYDS LNSGVSVAFV PFGPFTGYPS ILKGSRFLKP AQHLLEEFCD  240
VGSREIYTAK VLTLEDSSFF DPPIESFGDD DSQMAGGDGG ESRRQNSRLI SMLDEVYRRY  300
KQYYQQMQAV ARSFEYVAGL GNAAPYANLA IKAMARHFKC LKNAITEQLH FRSQNATHLR  360
HEKDGIPMLH TRSAYGQRSL HNSEFVEHQP VWRPQRGLPE RAVTVLRAWL FEHFLHPYPT  420
DSDKLTLAKQ TGLSRSQVSN WFINARVRLW KPMVEEIHML ETRQAQKDSQ RVDLSSNRSS  480
DDHLPSSNSI GSENPSTSTH RVQDTASKRT RRELHDHITM EATEQNVSYN NFPSHMHVGH  540
VGMNMAGASS SGVSLTLGLH QNNGNGFSDP FPINAAQRFG LGLDGSSENY AMGGFEAQNR  600
HFGRDVMGGQ FLHDFVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02030.1	2e-97	TALE family protein