PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP007569.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WRKY

Protein Properties

Length: 775aa MW: 86751 Da PI: 5.2329

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP007569.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	38.3	2.7e-12	282	322	22	59
EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 22 rsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +sYYrCt++ gC ++k+ver+ +dp ++++tY+g H ++ PCP007569.1 282 KSYYRCTYRatlGCGATKQVERDGDDPAMLTVTYRGVHVCK 322 79****9999************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 775 aa Download sequence
MDTSTALEAS PSSSPSSTTS SSSPYDVFMS FSEDTRKTFT DHLYWTMKDA GIDFFMEENE 60 SIRREENISD KVKQIIEGSK VSVIVFSSRY ADSIWCLEEL VQIMECRRTL KQMVLPIFYD 120 LSPSDVIGTF VLAFQKHRER FHEDTDIQEK LRRWTAALTA AAGLTVWTDA LTAAAGLTVR 180 VFRTTNGYEG MFVREIIAEI TVGIAFPELQ RLDSPELEDI GSTEHTDRAF FVSSANSPFS 240 LAPLKKRRHE PDRSDSTSRR FSKTWKVRVP ADILPDEYSW RKSYYRCTYR ATLGCGATKQ 300 VERDGDDPAM LTVTYRGVHV CKVAKPRFVE ERSEIQKSGL EQLHRGLQQQ QKAFIQDPLD 360 DNVQSLVSPD DVDHRDGVGR CMDVSKGFTF TEVNSIRASA TKVTSCHFSS DGKFLASGGH 420 DKKAVLWYTD TLKPKSVLEE LSALITDVRF SPSMTRLATS SFDKTVRVWD ANNPGYSLRT 480 FMGHSVSVMS LDFHPNKDDL ICSCDADGQI RYWSIHKGSC LCVSKGGTAQ MRFQPRLGRF 540 LAAAAENVVS ILDVETLTCQ HSLQGHTKPI HSVCWDPSGE FLASVSEDST LELWNMTENK 600 TMTLPAHDGL IASLAASTVT GSGSSYLYGF FDQACLALSF IVYESWVAPL QQLVVKAVSL 660 AIARDGASGG VVRTVVVLLG ITDPELHILD EFEGAVPEYE RSTVDVSLMD TSESLLVQAY 720 VWSNKNDPNL YGDWDFEKEW KQLHMKDFVK MIKMTSGFME KLELPESKPT VATDE

Sequence ? help Back to Top

Protein Sequence Length: 775 aa Download sequence

MDTSTALEAS PSSSPSSTTS SSSPYDVFMS FSEDTRKTFT DHLYWTMKDA GIDFFMEENE  60
SIRREENISD KVKQIIEGSK VSVIVFSSRY ADSIWCLEEL VQIMECRRTL KQMVLPIFYD  120
LSPSDVIGTF VLAFQKHRER FHEDTDIQEK LRRWTAALTA AAGLTVWTDA LTAAAGLTVR  180
VFRTTNGYEG MFVREIIAEI TVGIAFPELQ RLDSPELEDI GSTEHTDRAF FVSSANSPFS  240
LAPLKKRRHE PDRSDSTSRR FSKTWKVRVP ADILPDEYSW RKSYYRCTYR ATLGCGATKQ  300
VERDGDDPAM LTVTYRGVHV CKVAKPRFVE ERSEIQKSGL EQLHRGLQQQ QKAFIQDPLD  360
DNVQSLVSPD DVDHRDGVGR CMDVSKGFTF TEVNSIRASA TKVTSCHFSS DGKFLASGGH  420
DKKAVLWYTD TLKPKSVLEE LSALITDVRF SPSMTRLATS SFDKTVRVWD ANNPGYSLRT  480
FMGHSVSVMS LDFHPNKDDL ICSCDADGQI RYWSIHKGSC LCVSKGGTAQ MRFQPRLGRF  540
LAAAAENVVS ILDVETLTCQ HSLQGHTKPI HSVCWDPSGE FLASVSEDST LELWNMTENK  600
TMTLPAHDGL IASLAASTVT GSGSSYLYGF FDQACLALSF IVYESWVAPL QQLVVKAVSL  660
AIARDGASGG VVRTVVVLLG ITDPELHILD EFEGAVPEYE RSTVDVSLMD TSESLLVQAY  720
VWSNKNDPNL YGDWDFEKEW KQLHMKDFVK MIKMTSGFME KLELPESKPT VATDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31550.2	1e-12	WRKY family protein