PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP006865.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | GATA | ||||||||
Protein Properties | Length: 376aa MW: 41273.9 Da PI: 6.9072 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 55.9 | 5.7e-18 | 260 | 294 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +C t kTp+WR gp g+ktLCnaCG++y++ +l PCP006865.1 260 CMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRL 294 99*****************************9885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 376 aa Download sequence |
MEAPEYYKNS FCPQFTPEKR HSFDSSNNRT AVGGGGDHFM VEDLLDFSND DDAVITDGGC 60 PAAFDNVIGN STDSSPINVI DSCNSSSLSG SEPNFGPRNL TEGPFSSDLC VPCDDLAELE 120 WLSNFVEESF SSEDLQKLQL ISGMKSRPDQ PAFETRQFQP DPTRTNINPN GNNNPIFNPE 180 VSVPAKARSK RSRAAPCNWT SRLLLLSSTP EQSDVVVSAA EAASPFPPPS STGKKTVKAA 240 PKKKESQEGS GGGPGDGRKC MHCATDKTPQ WRTGPMGPKT LCNACGVRYK SGRLVPEYRP 300 AASPTFVLTK HSNSHRKVLE LRRQKEIVRA QQTFIHQVPP PQHHHHHHHQ NMVFDVSNGG 360 DYLIHQHVGP DFRQLI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G25830.1 | 8e-78 | GATA family protein |