PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP006399.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C2H2
Protein Properties Length: 265aa    MW: 29301 Da    PI: 4.6149
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP006399.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.10.00013221237117
                  EEETTTTEEESSHHHHH CS
      zf-C2H2   1 ykCpdCgksFsrksnLk 17 
                  ++C++C+k+F+r  nL+
  PCP006399.1 221 FSCSICSKTFNRYNNLQ 237
                  89**********99997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MADPYNSSNL DNNGWINFMP LHPHDCPSLL STATSYANSS RSTPLTFSVS NPPHTYSSHN  60
FLTDKKSSNI QTQMPLSIND HINVSSPPLK EALPLLNNLL SPRGVLEEKH GHEPSSSSTI  120
TPIEEETRNK DHAVYDDGDD SGDDEDNLIV ALHIGLPSSS NSGNVQSQFA DQVHNKEGLI  180
SSSNSDVVSS GNPSVAVNRL NKGDRYWIPT PSQILIGPTQ FSCSICSKTF NRYNNLQDSF  240
SKEKDEGDGE IIVYINWWQL DMYYN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57670.17e-17C2H2 family protein