PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP006381.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 294aa MW: 33290.6 Da PI: 7.5195

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP006381.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	90.1	3.7e-28	21	151	3	127
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 + +rFhPt++e+ ++L+kk++++k ++ ++++ +d++k+ePwdLp+ + k wy Fs d ky ++ r nr+t++g Wk tgk +++ PCP006381.1 21 AAIRFHPTEKEMA-DFLRKKMKSHKSQACHFLPVIDVCKFEPWDLPEhmfpDSVFQAKAWYSFSWCDYKYINSLRCNRVTEHGSWKITGKPRDISL-- 115 568******99.9******999999**********9535552223789********************************99.. PP NAM 97 gelvglkktLvfy.....kgrapkgektdWvmheyr 127 + + k+tL+f +g a+k+++t W++hey PCP006381.1 116 KYFTCKKRTLTFQiktfqEGGASKSVRTGWIIHEYY 151 556777889999888887899************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MENSSTTTRT TTAQSVPDMV AAIRFHPTEK EMADFLRKKM KSHKSQACHF LPVIDVCKFE 60 PWDLPEHMFP DSVFQAKAWY SFSWCDYKYI NSLRCNRVTE HGSWKITGKP RDISLKYFTC 120 KKRTLTFQIK TFQEGGASKS VRTGWIIHEY YCTKPKQGSS PRQERDLKRD YVLCLLKYKP 180 VDSKSDKKKP EGTSVCDDLA DPGNSGYIAS SPRDDHTTSA AAMNHMTPDT EEVLTYKELE 240 DDLLGSGNHD HGEPGGGVSS DSIDQALRDM IHEREVSGCV GPLSFMTKSS TLYL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.3	2e-24	NAC family protein