PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP006266.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 355aa    MW: 39753 Da    PI: 6.1343
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP006266.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY89.13.7e-28130190259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                  +Dg++WrKYGqK++ g+++prsYYrCt++   +C+++k+v+rs+edp+v+eitY+g+H+++
  PCP006266.1 130 EDGHCWRKYGQKDILGTKHPRSYYRCTYRnleSCWATKQVQRSDEDPTVFEITYKGKHTCS 190
                  8***************************99999**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MDSSKSSDHK SLVNEIIEGL ELAKQLRLSL NAKSSSDKKQ FLVQRILSSY EKALLMLKCS  60
VSPQSPIGAI TSVPESQMSA GAGPCCDDNN TSLQDRHDLT EVSKKRKEMA KWTEHVTRVS  120
SENGIEGAHE DGHCWRKYGQ KDILGTKHPR SYYRCTYRNL ESCWATKQVQ RSDEDPTVFE  180
ITYKGKHTCS HGRSSVPPPP SPEKQEQKRH NHNDTYQQQQ SQGNQISFPT NLRVNTENLD  240
DRENMASPFS FTSTSFGCMN NDDAFHSLML DDNSLLDNFN QSLLSPAAGG SNNYFEPASQ  300
MRNIAGKEQR SESDLAEIIS AKKSSTNSSI PDIDFSLEPV ELGSYFPFDC PGFFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.16e-54WRKY family protein