PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP005467.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | NF-YA | ||||||||
Protein Properties | Length: 245aa MW: 27309.5 Da PI: 7.1783 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 102.5 | 4e-32 | 150 | 206 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep++VNaKQy++Il+RRq+Rak+e+e+k k+rkpylheSRh+hAlrR+Rg+gGrF PCP005467.1 150 EEPVFVNAKQYHGILRRRQSRAKAESENKA-LKNRKPYLHESRHQHALRRARGCGGRF 206 69***************************9.9*************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MHGTGDLFVL RDLVDFMIFE LFRELHIVLG LFTYNILMIS SVRDHSDNSD SDDQQSHSES 60 QVHSSLPAIG MSHPGVPTPN MQYAVPPQVG TGHAVAQGGY PYPDPYYRSI FAPYETQPYP 120 PQPYVAQPTV HLQLMGIQQA GVPLPSDAVE EPVFVNAKQY HGILRRRQSR AKAESENKAL 180 KNRKPYLHES RHQHALRRAR GCGGRFLNAK KNGNQQDEMT SGDKSQSNIN LNTDKNELAS 240 SDGTS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30500.2 | 2e-63 | NF-YA family protein |