PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP004448.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 312aa    MW: 34875.6 Da    PI: 4.5984
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP004448.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.83.1e-1978126355
          AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a+++ ++k++g
  PCP004448.1  78 YRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDREARKIRG 126
                  9*******.**********954...4*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MCGGAIISDF IPRDRRPRVT ASDIWPDSPF AKFNPDTFFD CNPTPTTHTD SNPRKKSKPI  60
SGNVQEEKPA KRQRKNLYRG IRQRPWGKWA AEIRDPRKGV RVWLGTFNTA EEAARAYDRE  120
ARKIRGNKAK VNFPNEDDDL PAQTYLRKPN PPLFQPKSFE LGFEYDLNQF AAFPSNSNSD  180
GFYSMAIANT DPIVISGEEN SWSGSDGAFS SKGLLGCNQN GMGGCHGGAE LTEVEETQEG  240
ELSLEAIARM EDDEVQKLSE ELMAYENMMK FYQIPYLDGQ SMAAPQNPPP QESTVGDELW  300
SFDNDEGVPA SV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47520.11e-36ERF family protein