PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP004205.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 340aa MW: 37146.3 Da PI: 7.5527

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP004205.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.9	0.00041	206	244	12	55
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ +++ L +l+ + +K + a++L +A+ YI+ Lq PCP004205.1 206 RKEKLGDRITSLHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 244 6678889999999999998.....8******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 340 aa Download sequence
MMAGNPNWWS SMHPPSLFPS QYVQLGSPNS LPLPDHNLEP PQSWSQLLLG GLSSQEDTFG 60 TLSHNFQPKS RLESWEEDQI LITQYPRAAL PPHGVDSIIK QEANSQNSIN LLGSSPHGDE 120 EFQLQAPSSC RPVWSPVQTM PVSSPRSCVT SLSNTNNILD FSYNKTDNKR NQHADHSSEC 180 NSTATGGTSK KARVQQSPSQ PPLKVRKEKL GDRITSLHQL VSPFGKTDTA SVLLEAIGYI 240 RFLQGQIEAL SSPYLGNASK NTRKQQSVQG GRNCVFPLDA GQLLNDNCLK SKGAPNQESQ 300 DHKAKDLRSK GLCLVPVSCT QHVGSDNGAD YWAPAYGNGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29100.1	1e-77	bHLH family protein