PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP003983.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 361aa    MW: 39104.8 Da    PI: 7.3952
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP003983.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.33.6e-13119163347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + ++lG+g+W+ Iar   ++Rt+ q+ s+ qky
      PCP003983.1 119 PWTEEEHRMFLIGLQKLGKGDWRGIARSYVTTRTPTQVASHAQKY 163
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MTRRCSHCSN NGHNSRTCPT RVGSSSSSPS LCGGGGVKLF GVRLTDGSII KKSASMGNLS  60
SAVAHYHSSP PNPDSPSSDP LHDPVHVPDG YLSDDPAHAS SSVNRRGDRK KGLELTGTPW  120
TEEEHRMFLI GLQKLGKGDW RGIARSYVTT RTPTQVASHA QKYFIRQSNA TRRKRRSSLF  180
DMVPDMAMDP PPVPEEQVFL PSSREGESED ANSLPSLNLS LSSETKPMET THEEKVIELD  240
QEPAMGSNGF PPMAPPYIPA YTSYPWPYWA PSAGPFREMV GEPSHQPVLR PIPIVPKEPV  300
NVDALGMSQL SLGEREGGLK EPSPLSLRLL GEPSRQSAFH PNAPASEPDV SKGKSSAIQA  360
V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16350.14e-86MYB_related family protein