PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP003902.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 351aa    MW: 38148.7 Da    PI: 7.7764
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP003902.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.51.3e-12112156347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT++E+  ++ + ++lG+g+W+ Iar   ++Rt+ q+ s+ qky
      PCP003902.1 112 PWTEDEHRMFLIGLQKLGKGDWRGIARSYVTTRTPTQVASHAQKY 156
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MTRRCSHCSN NGHNSRTCPT RVGSSSSSPS LGGGVKLFGV RLTDGSIIKK SASMGNLSSA  60
AAHYHSSSPN PDSPSSDPLH DPVHVPDGYL SDDPAHASSS VNRRGDRKKG TPWTEDEHRM  120
FLIGLQKLGK GDWRGIARSY VTTRTPTQVA SHAQKYFIRQ SNATRRKRRS SLFDMVPDMA  180
PPLPEEQIFL PSSWEGDSED ANSLPSLNLS LSSESKPMET THEETVIEHD HEPAMGSNGF  240
PPMPPPYVPA YMSYPWPYWA PSAGPFREMV GEPSRQPVLR PIPIVPKEPV NVDALGMSQL  300
SLGETERGVK EPSPLSLKLL GEPSRQSAFH PNAPASEPDL SKGKSSAIQA V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16350.14e-84MYB_related family protein