PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP003707.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 356aa    MW: 38977.4 Da    PI: 6.7922
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP003707.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.41.2e-20176225255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                   y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+g
  PCP003707.1 176 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYKLRG 225
                  59******9.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MAATMDFYSC RSALYSSSDP FRGELMEALE PFMKSVSSLP PPPSSLPTTT ASPPFSSASL  60
LPSFPSTSYD FLSFPNQPTY YHDGCSTSSM TQVFSDGFFE QQPPSIGLNH LTPSQIHQIQ  120
AQIQSQSQPQ QPQISWDNYH HQVSQTSSRT LSFLSPKPIP MKQVGSAGSP PKPTKLYRGV  180
RQRHWGKWVA EIRLPKNRTR LWLGTFDTAE EAALAYDKAA YKLRGDFARL NFPHLRHNGS  240
VVGGEFGEYK PLHSSVDAKL QAICEGLAET QKQGKSGKPA KRSSAASRQP EPETLAVKVE  300
TSSPVTTDSE GSAGSSPLSD LTFCDSTEPW ENSGASESTS VLEKYPSEID WASILS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.13e-82ERF family protein