PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP001922.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

G2-like

Protein Properties

Length: 516aa MW: 56886.9 Da PI: 6.9408

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP001922.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.5	6.1e-28	228	282	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++WtpeLH+rFv+aveqL G +kA+P++ilelm+v++Lt+++++SHLQkYR++ PCP001922.1 228 KVKVDWTPELHRRFVQAVEQL-GVDKAVPSRILELMGVDCLTRHNIASHLQKYRSH 282 5689***************.******************************86 PP
2	Myb_DNA-binding	39.2	1.6e-12	231	280	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e++ ++v+av+qlG + +++I + mg +t+ ++ s++qky+ PCP001922.1 231 VDWTPELHRRFVQAVEQLGVDkaVPSRILELMGvDCLTRHNIASHLQKYR 280 57******************************889**********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 516 aa Download sequence
MLLLSPLTEG RHHHQLKDEK QLGDDGDVES SFAFNGGNNT VLDFPEFSGG MGMGNLLDSI 60 DFDDLFIGIH DGDVLPDLEM DSEILDFSVP APADDINTKT TPPPPSKEEE EVADDYYNTT 120 KTTTTSSKVE DQEEEDLHGH GEVAAAAVSI TSTNNNSGLN QNYSSSSTTT TPDNRGDQEI 180 VSKRDDINQI RAACRPSSGS TRRKSADHKL ATKSSPTAQS KKSHGKRKVK VDWTPELHRR 240 FVQAVEQLGV DKAVPSRILE LMGVDCLTRH NIASHLQKYR SHRKHLLARE AEAASWTQRR 300 QMYGAAAAAG GGAGPKSRRD VMMMNNPNWL NAPTIGFPSI TSTTPPPMHH AQHHRQLIRP 360 LHVWGHPTMD QSMMHMWPPK HHLPHHFPPP VLPPPPPAPA HAWPPGPPPP PDASYWHHPH 420 SHHQRQRFHT PPVPGIPPHA MYKVEPARIA APTPPQSGPH LLLDFHPSKE SIDAAIGDVL 480 SKPWLPLPLG LRPPTTDTVM VELQRQGVQK FPPSCA

Sequence ? help Back to Top

Protein Sequence Length: 516 aa Download sequence

MLLLSPLTEG RHHHQLKDEK QLGDDGDVES SFAFNGGNNT VLDFPEFSGG MGMGNLLDSI  60
DFDDLFIGIH DGDVLPDLEM DSEILDFSVP APADDINTKT TPPPPSKEEE EVADDYYNTT  120
KTTTTSSKVE DQEEEDLHGH GEVAAAAVSI TSTNNNSGLN QNYSSSSTTT TPDNRGDQEI  180
VSKRDDINQI RAACRPSSGS TRRKSADHKL ATKSSPTAQS KKSHGKRKVK VDWTPELHRR  240
FVQAVEQLGV DKAVPSRILE LMGVDCLTRH NIASHLQKYR SHRKHLLARE AEAASWTQRR  300
QMYGAAAAAG GGAGPKSRRD VMMMNNPNWL NAPTIGFPSI TSTTPPPMHH AQHHRQLIRP  360
LHVWGHPTMD QSMMHMWPPK HHLPHHFPPP VLPPPPPAPA HAWPPGPPPP PDASYWHHPH  420
SHHQRQRFHT PPVPGIPPHA MYKVEPARIA APTPPQSGPH LLLDFHPSKE SIDAAIGDVL  480
SKPWLPLPLG LRPPTTDTVM VELQRQGVQK FPPSCA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20570.1	3e-73	G2-like family protein