PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP001832.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TCP

Protein Properties

Length: 460aa MW: 51171.6 Da PI: 8.9817

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP001832.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	140.4	1.4e-43	165	311	2	131
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt................ssssaseceaesssssas 83 gkkdrhski+T++g+RdRR+Rls+++a++fFdLqd LGfdk+sktieWL++++k aik+l + + ++++s++ PCP001832.1 165 SGKKDRHSKICTAQGPRDRRMRLSVQIARKFFDLQDTLGFDKASKTIEWLFTKSKSAIKDLKQHllvspkedysstnggaT----------AKVNSSE 252 69************************************************************99887655544333220..........2222222 PP TCP 84 nsssg..........kaaksaa.kskksqksaasalnlakesrakarararertrekmr 131 n + + +aa+ + + ++k++ + +a+esr +arararertrekm+ PCP001832.1 253 NTTGEvtsrimepssSAANGDIsVGFGREKRNRKLCVVARESRVEARARARERTREKMM 311 1111144455566545555555344455555555567777***************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence
MFPSSSTTSN FQLPFLCDDN QTNAIIDDFH QNPNSILSHG GHHQYYSQYY YSEDQQQQAP 60 DFLEHDGMLL SYLLSQQQLL LGNSGTTTNV ATDNNHTRAH ESTEISIAAS NSNKAMEVIN 120 RDDDDGRNEL TVNTAAASKI KKNNVKTNGG GGGEKKAKVA RKRASGKKDR HSKICTAQGP 180 RDRRMRLSVQ IARKFFDLQD TLGFDKASKT IEWLFTKSKS AIKDLKQHLL VSPKEDYSST 240 NGGATAKVNS SENTTGEVTS RIMEPSSSAA NGDISVGFGR EKRNRKLCVV ARESRVEARA 300 RARERTREKM MRIRGFDQDH QHLTKQSPNH HEHQNPNELF ETAGMMNSAM MSTNCCNDGQ 360 KIVGRTSSSC GGVQRSFLNF DFWRHVSEAS GANSEDCGFP GNWGAINYTK NIITGNVLQV 420 EQNPTSYPKQ QNPRSIFGTG TQEQNPNSIF LTTFIKAQDP

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence

MFPSSSTTSN FQLPFLCDDN QTNAIIDDFH QNPNSILSHG GHHQYYSQYY YSEDQQQQAP  60
DFLEHDGMLL SYLLSQQQLL LGNSGTTTNV ATDNNHTRAH ESTEISIAAS NSNKAMEVIN  120
RDDDDGRNEL TVNTAAASKI KKNNVKTNGG GGGEKKAKVA RKRASGKKDR HSKICTAQGP  180
RDRRMRLSVQ IARKFFDLQD TLGFDKASKT IEWLFTKSKS AIKDLKQHLL VSPKEDYSST  240
NGGATAKVNS SENTTGEVTS RIMEPSSSAA NGDISVGFGR EKRNRKLCVV ARESRVEARA  300
RARERTREKM MRIRGFDQDH QHLTKQSPNH HEHQNPNELF ETAGMMNSAM MSTNCCNDGQ  360
KIVGRTSSSC GGVQRSFLNF DFWRHVSEAS GANSEDCGFP GNWGAINYTK NIITGNVLQV  420
EQNPTSYPKQ QNPRSIFGTG TQEQNPNSIF LTTFIKAQDP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68800.1	2e-30	TCP family protein