PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP001342.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 347aa    MW: 38082.3 Da    PI: 5.4308
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP001342.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.72.4e-092773171055
                  HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  r+RR +iN ++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  PCP001342.1 277 RKRRGKINARLRILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 317
                  9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MESAAAIPNG GWSSLGAMYS SDEEAEFMSQ LLSNCCVTNE MNEASSSAIP CAICPSYDFS  60
KSNMEGIYQG SQYSSEIANL YFSNVSAYIM SNNETNHYNG NPNRIMETSY HNSEAFRPSD  120
ANATNLILIH GKEYGMDHHQ ELSNVNIENQ PGAAIYEKLL QLNRESDHEM TIWEPAMDNE  180
VMVSEGSKKR PRSSVDVQKN RNVKAKKGQK AVLRGNVEDN DKTAKGQSSS SSCLGDDDSI  240
NASHQDLSGG VSTSSLSPKG KKASKGSATD SQSLYARKRR GKINARLRIL QNLVPNGTKV  300
DISTMLEEAV QYVKFLQLQI KLLSSDDIWM FAPIAYNGIN IAIDLNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.11e-47bHLH family protein