PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP001336.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 369aa    MW: 41247.3 Da    PI: 7.4073
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP001336.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY1048.2e-33208265259
                  --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                  +Dgy+WrKYGqK vk+s++prsYYrCt+++C vkk+vers +d ++v++tYeg+Hnh+
  PCP001336.1 208 EDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCIVKKRVERSFQDSSIVITTYEGQHNHQ 265
                  8********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    
MSNEKKNPYQ YDPFDYNHHE IKKSSCPFFN YGTSSLYQNP SHDPQTLNGF GSDHPNSFMS  60
FTDCLHGSLD YNTLSKAFDM SCSSSEVISP PLDHDNNSNK QQAAAAGVGD HSVGTNSTTE  120
NPSTPNYSSI SSSPNEAAGA GAVAVAVDNQ VLDEDSDHKS KKDKHPKLWS DGDDEDKSKK  180
GNKAKKKEKR KREPRFAFLT KSEVDHLEDG YRWRKYGQKA VKNSPYPRSY YRCTTQKCIV  240
KKRVERSFQD SSIVITTYEG QHNHQCPATL RGNLNLNAVG MLSPNSLLAS ASLSGSAKFS  300
HEFLAQFLPM DNQLQLQSHQ HDHPPSSTLY STLMSPHHHH HNQQQQQLPA SDHGLLQDLV  360
PSFSHKQEP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29860.14e-48WRKY family protein