PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP000865.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

ERF

Protein Properties

Length: 1834aa MW: 208664 Da PI: 6.3277

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP000865.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	55.7	1.2e-17	80	129	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr++ +g+WvAeIr+p r r +lg+f ta eAa a+++a+k+++g PCP000865.1 80 NYRGVRQRT-WGKWVAEIREPD----RgSRLWLGTFPTAVEAALAYDEAAKAMYG 129 69**999.******82....34**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 1834 aa Download sequence
MGAYDQGVNM PYLPLDSSRK RKTRSRRDGN SVADTLEKWK EYNKQLESAN EEGKKRKVPA 60 KGSKKGCMKG KGGPENARCN YRGVRQRTWG KWVAEIREPD RGSRLWLGTF PTAVEAALAY 120 DEAAKAMYGA GARLNLPHGV NNHPSSSQET SSVATPSGSS AAATPGCSTS TSTSSHSEVC 180 GDENSKLFLN VKKEDGEGES RMYPWSGAVP QASGMVKPEV SEDVDMDYLR NNQQQPVVVK 240 PERGVEDHNP NGGDGFVGDC SENFTMCELF DMDEMFDANE LLMPSDDTSF CNSGPEQASR 300 PDVGQPGMET LSSEGPSNLS YQLQFPDAKL LGSLPHMEQA PLDYEYGFDF MKQEEGSNHT 360 SQNDQGYFNL GPSDLGLGGF TEDILLVTGS GNLLRDSDTN WLMRMKRKRH LYRAKHPFDA 420 NPFEALCCGS WQPVEVLSIR RGKMTMSFGN NHPCIIRDKG PFANLRVRSR HANMYDCTCF 480 LRPGVDICVL STPEHTDDSE EGSRDPVMVD ARISSIERVP HESDRCSCQF YVNFYVNQGP 540 LGTERATLNK EAKLVGIDEI FVFQMIDRDA YENQPYRWEC SADCPTLPRT KLLLGTFLSD 600 VSWLLVASVM KRVIFDIRSV KTKIVYQILE GDNDRTLLHS DNFLHAVNFK VDNGLLVPMV 660 VEFVPDDATE ADPTPEMDEG VPSPSTELVG LRRSKRRIIQ PERFLACDAP SEIEIGYVRS 720 RPYKVDYSSE DDELYIPLSQ LFAKHASHSE EHTEAEQKFR PKKLKSSKDD NYWKTEEELA 780 CKSDDDDDVE YKIKTKSKKV KSGAGKQKRH RDELALVEYR RDPLTLGHGH RSVNSTPEKG 840 ANESDEFPAK YYYHHNRKTK RKNNSDLDDM DFQMKWDGKV STSRASRVLY RRHHSIRSKR 900 DPNGRTYPRR SLNTGAYKEL INSFLKDMDC TNKPDANIMD QWNEFKAAKN SDQRKETEMP 960 ENDDEEEEMS ETEMLWKEME LALASAYLQD NEGSNAAAAN ASPPKSDSAC RHEFKLNEEI 1020 GIICSICGFV STEIRDVSPP FVQNASVDTY DRKSNVEEPD NKRAEYEEFN FFHTRTTPDD 1080 PETLSEESDN VWALIPELRK KLLFHQKKAF EFLWKNVAGS LEPSLMERKA KKTGGCVISH 1140 TPGAGKTFLI IAFLTSYLKL FPGKRPLVLA PKTTLYTWYK EFIKWQIPIP VYLIHGRRTY 1200 RVFKKKTINF TGGPKPTDDV MHVLDCLEKI QKWHAQPSVL VMGYTSFLTL MREDSKFVHR 1260 KFMAQVLRES PGLVVLDEGH NPRSTKSRLR KGLMKVETDL RILLSGTLFQ NNFCEYFNTL 1320 CLARPKFVNE VLRALDPKYR RIKKGKEKAR HLMEARARKL FLDKIAKKID SNEEEDQRIQ 1380 GLNQLRHITN GFIDVYEGGN SDTLPGLQIY TLLMNTTDIQ RDMLDRLQNI MANYKGYPLE 1440 LELLITLGSI HPWLITTACC AGKFFRPEEL MELEQYKYDL HKGSKVKFVL NLVYQVVRNE 1500 KVLIFCHNIA PVRLFLELFE RVFGWQRGRE VLVLTGDLEL FDRGKVMDKF EEPGGASRVL 1560 LASITACAEG ISLTAASRVI LLDSEWNPSK TKQAIARAFR PGQQKVVYVY QLLATGTLEE 1620 DKYGRTTWKE WVSSMIFSEA FVEDPSRWQA EKIEDDVLRE MVAEDKSKSF HMIMKNEKAS 1680 TVVRGMHCDA TINACMELEF AMNSNFGSSS DSNWGSSSNS KLEAKWAQMR REDEECDEEV 1740 QLDRAGRPGF SPHQKVIVAL RMMAYGSPAD SIDETHGMSE STSLDILQQF CDTIVQVHRD 1800 EYLHELNQED LNRLLRKSED RGFLGMIGSL DCMH

Sequence ? help Back to Top

Protein Sequence Length: 1834 aa Download sequence

MGAYDQGVNM PYLPLDSSRK RKTRSRRDGN SVADTLEKWK EYNKQLESAN EEGKKRKVPA  60
KGSKKGCMKG KGGPENARCN YRGVRQRTWG KWVAEIREPD RGSRLWLGTF PTAVEAALAY  120
DEAAKAMYGA GARLNLPHGV NNHPSSSQET SSVATPSGSS AAATPGCSTS TSTSSHSEVC  180
GDENSKLFLN VKKEDGEGES RMYPWSGAVP QASGMVKPEV SEDVDMDYLR NNQQQPVVVK  240
PERGVEDHNP NGGDGFVGDC SENFTMCELF DMDEMFDANE LLMPSDDTSF CNSGPEQASR  300
PDVGQPGMET LSSEGPSNLS YQLQFPDAKL LGSLPHMEQA PLDYEYGFDF MKQEEGSNHT  360
SQNDQGYFNL GPSDLGLGGF TEDILLVTGS GNLLRDSDTN WLMRMKRKRH LYRAKHPFDA  420
NPFEALCCGS WQPVEVLSIR RGKMTMSFGN NHPCIIRDKG PFANLRVRSR HANMYDCTCF  480
LRPGVDICVL STPEHTDDSE EGSRDPVMVD ARISSIERVP HESDRCSCQF YVNFYVNQGP  540
LGTERATLNK EAKLVGIDEI FVFQMIDRDA YENQPYRWEC SADCPTLPRT KLLLGTFLSD  600
VSWLLVASVM KRVIFDIRSV KTKIVYQILE GDNDRTLLHS DNFLHAVNFK VDNGLLVPMV  660
VEFVPDDATE ADPTPEMDEG VPSPSTELVG LRRSKRRIIQ PERFLACDAP SEIEIGYVRS  720
RPYKVDYSSE DDELYIPLSQ LFAKHASHSE EHTEAEQKFR PKKLKSSKDD NYWKTEEELA  780
CKSDDDDDVE YKIKTKSKKV KSGAGKQKRH RDELALVEYR RDPLTLGHGH RSVNSTPEKG  840
ANESDEFPAK YYYHHNRKTK RKNNSDLDDM DFQMKWDGKV STSRASRVLY RRHHSIRSKR  900
DPNGRTYPRR SLNTGAYKEL INSFLKDMDC TNKPDANIMD QWNEFKAAKN SDQRKETEMP  960
ENDDEEEEMS ETEMLWKEME LALASAYLQD NEGSNAAAAN ASPPKSDSAC RHEFKLNEEI  1020
GIICSICGFV STEIRDVSPP FVQNASVDTY DRKSNVEEPD NKRAEYEEFN FFHTRTTPDD  1080
PETLSEESDN VWALIPELRK KLLFHQKKAF EFLWKNVAGS LEPSLMERKA KKTGGCVISH  1140
TPGAGKTFLI IAFLTSYLKL FPGKRPLVLA PKTTLYTWYK EFIKWQIPIP VYLIHGRRTY  1200
RVFKKKTINF TGGPKPTDDV MHVLDCLEKI QKWHAQPSVL VMGYTSFLTL MREDSKFVHR  1260
KFMAQVLRES PGLVVLDEGH NPRSTKSRLR KGLMKVETDL RILLSGTLFQ NNFCEYFNTL  1320
CLARPKFVNE VLRALDPKYR RIKKGKEKAR HLMEARARKL FLDKIAKKID SNEEEDQRIQ  1380
GLNQLRHITN GFIDVYEGGN SDTLPGLQIY TLLMNTTDIQ RDMLDRLQNI MANYKGYPLE  1440
LELLITLGSI HPWLITTACC AGKFFRPEEL MELEQYKYDL HKGSKVKFVL NLVYQVVRNE  1500
KVLIFCHNIA PVRLFLELFE RVFGWQRGRE VLVLTGDLEL FDRGKVMDKF EEPGGASRVL  1560
LASITACAEG ISLTAASRVI LLDSEWNPSK TKQAIARAFR PGQQKVVYVY QLLATGTLEE  1620
DKYGRTTWKE WVSSMIFSEA FVEDPSRWQA EKIEDDVLRE MVAEDKSKSF HMIMKNEKAS  1680
TVVRGMHCDA TINACMELEF AMNSNFGSSS DSNWGSSSNS KLEAKWAQMR REDEECDEEV  1740
QLDRAGRPGF SPHQKVIVAL RMMAYGSPAD SIDETHGMSE STSLDILQQF CDTIVQVHRD  1800
EYLHELNQED LNRLLRKSED RGFLGMIGSL DCMH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	18	23	SRKRKT
2	19	57	RKRKTRSRRDGNSVADTLEKWKEYNKQLESANEEGKKRK
3	21	28	RKTRSRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G05410.2	4e-34	ERF family protein