PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP000653.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 249aa    MW: 28095.7 Da    PI: 4.6998
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP000653.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2612.7e-19109158355
          AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr+++ +g+++AeIrd + ng   r++lg+f+tae Aa a+++a+++++g
  PCP000653.1 109 YRGVRRRP-WGKFAAEIRDSTRNG--VRVWLGTFDTAEAAALAYDQAALSMRG 158
                  9*******.**********44465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MDLSFFQNRN SEFSFESSSS FNSLEYYSHD DHLSWNMFDF KDYHNQSAFP QLPFNENDSE  60
EMLLYGVLAE APAGDQNSSD SIVSSTHSKD HEEVNSSSAT ANEDQVVAYR GVRRRPWGKF  120
AAEIRDSTRN GVRVWLGTFD TAEAAALAYD QAALSMRGSS AVLNFPADVV HQSLVEMKYG  180
FEEGSSPVLA LKTRHSMKRK SSMNKKKKSL HHNQHQKNDE EGEDQLEKVV VFEDLGADYL  240
EELLGISES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.11e-54ERF family protein