PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP000157.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB
Protein Properties Length: 341aa    MW: 37854.1 Da    PI: 7.9989
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP000157.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.78.5e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd +lv ++++ G+g+W++++   g++R+ k+c++rw +yl
      PCP000157.1 14 KGPWTPEEDIILVSYIQERGPGNWRAVPTNTGLHRCSKSCRLRWTNYL 61
                     79********************************************97 PP
2Myb_DNA-binding47.63.8e-1567112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T  E++ ++++ ++lG++ W++Ia++++  Rt++++k++w+++l
      PCP000157.1  67 RGNFTDKEEKMIIHLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 112
                      89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MGRPPCCDKE GVKKGPWTPE EDIILVSYIQ ERGPGNWRAV PTNTGLHRCS KSCRLRWTNY  60
LRPGIRRGNF TDKEEKMIIH LQALLGNRWA AIASYLPQRT DNDIKNYWNT HLRKKLSKLQ  120
AEGGGAEGLH SKDQGLNSNS SSQPISRGQW ERRLQTDIHM ARQALRDALS PEKPLTLSSD  180
LNPTDGFSIS SPKKPTLDQS SSSTYASSTE NISRLLKGWM KNPPKKSASL TNLANNKTDY  240
QHYSSSEGTT SVANTANSGN VELSDTFESL FGFESSNSDL SPSMSPDSLF QGESKPDLIS  300
DQLPLSFLEK WLFDESAAPA ALGKDHFFSD MLSDHGNANF L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47600.16e-99MYB family protein