PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP000057.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

G2-like

Protein Properties

Length: 427aa MW: 48024.5 Da PI: 8.0324

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP000057.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	95.1	5.5e-30	251	305	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rW+++LHe Fve+v++LGG+ekAtPk+il++m ++gLt+ hvkSHLQkYR+ PCP000057.1 251 KTRIRWNQDLHEMFVECVNRLGGAEKATPKAILKMMCLDGLTIFHVKSHLQKYRI 305 68****************************************************7 PP
2	Myb_DNA-binding	43	1e-13	255	304	3	48
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rW ++++e +v++v++lGg t+k+I ++m g+t ++ks++qky+ PCP000057.1 255 RWNQDLHEMFVECVNRLGGAekaTPKAILKMMClDGLTIFHVKSHLQKYR 304 9***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
MNEKKIDCQE RNQQSHGLIS ECNFEVGNQS YQIFGEQQQQ AWNNMGIWVQ QPTMDHGVSL 60 LQNLGPPKSP SSITSRLESP ASAFYATERC MGGFPQYDSQ VGNNPHFPSG QSYNESYSSM 120 NSSEQTDLDF DIRNTLQSIV KTQPRSYQYH KSSEKFNQIP GSDLSGCKLF AHQSNKLHGD 180 HKTTTIRRPS LSLPSKENQD QVGCYTSFNT SPVTQPSFFS QQGKQSPRYS SGNVSAAYGN 240 SPSTSPVLSS KTRIRWNQDL HEMFVECVNR LGGAEKATPK AILKMMCLDG LTIFHVKSHL 300 QKYRIAKYLP YPAEGKSEKR TTLNFEPHLV VKTGLQIKEA LQLQLDVQRR LHEQLEIQRK 360 LQLRIEEQGK QLKEMFDLQQ QASSSLLKTQ NVDVTCHEAG PSNSLDDTDQ VSTSEGSANT 420 SFHSKIS

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

MNEKKIDCQE RNQQSHGLIS ECNFEVGNQS YQIFGEQQQQ AWNNMGIWVQ QPTMDHGVSL  60
LQNLGPPKSP SSITSRLESP ASAFYATERC MGGFPQYDSQ VGNNPHFPSG QSYNESYSSM  120
NSSEQTDLDF DIRNTLQSIV KTQPRSYQYH KSSEKFNQIP GSDLSGCKLF AHQSNKLHGD  180
HKTTTIRRPS LSLPSKENQD QVGCYTSFNT SPVTQPSFFS QQGKQSPRYS SGNVSAAYGN  240
SPSTSPVLSS KTRIRWNQDL HEMFVECVNR LGGAEKATPK AILKMMCLDG LTIFHVKSHL  300
QKYRIAKYLP YPAEGKSEKR TTLNFEPHLV VKTGLQIKEA LQLQLDVQRR LHEQLEIQRK  360
LQLRIEEQGK QLKEMFDLQQ QASSSLLKTQ NVDVTCHEAG PSNSLDDTDQ VSTSEGSANT  420
SFHSKIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06800.1	1e-69	G2-like family protein