PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu064682.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

Protein Properties

Length: 670aa MW: 73841.9 Da PI: 5.1483

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu064682.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	56.9	3.7e-18	132	229	3	98
EE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 3 kvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 +vl+ sd+++ grlvlpk +ae++ ++++ e++ ++++d +g++W++++++ +++s++yvl+ G + ++++gD+v+F++++ +++lv++ Oeu064682.1 132 QVLSASDAGRIGRLVLPKACAEAYfpSINQSEGIPIRIQDIKGKEWTFQFRFwpNNNSRMYVLE-GVTPCIQNMQVQAGDTVTFSRID-PGGQLVIGC 227 57899*******************888889999***********99899999999.*******************887.888888888 PP E- CS B3 97 fr 98 ++ Oeu064682.1 228 RK 229 76 PP

Sequence ? help Back to Top
Protein Sequence Length: 670 aa Download sequence
MGSKICMNEV CRATTSSVWK KGXLNFVEMG SKICMNEVCR ATTSSVWKKG WVLNSGGFAT 60 LCYNCGSAYE NSVYCETFHR DESGWRQCAK CGKGIHCGCI ASRYSHEYLD FGGVGCINCV 120 KSSEIHSVQS MQVLSASDAG RIGRLVLPKA CAEAYFPSIN QSEGIPIRIQ DIKGKEWTFQ 180 FRFWPNNNSR MYVLEGVTPC IQNMQVQAGD TVTFSRIDPG GQLVIGCRKA TDNVDTQDTQ 240 TPLLPNDDSP GETSFSGPTD NPLSVSFNKN ILLIEMLLNG AKTSDDSMQQ HKPVSEKKKT 300 RNMKNKRLLM HSEDAMELRI TWEEAQELLR PPPTVQPTIV TIEDHAFEEY DEPPVFGKRT 360 IFTSQPSGEQ EQLAQCDSCS KWRRLPVHVL LPAKWTCSEN LWDSNRSSCS IPEDINSSDM 420 SASFRVCKES KRRRSADNKA SKDGEPSGLD ALATAAVLGD NMDDLAESLV GATTKHPRHR 480 PGCTCIVCIQ PPSGKGKHEP TCECNVCLTV KRRFKTLMLR KKQRQSELAA ELALGKDEAQ 540 VDVKLENDDD IAGQALLQMN LPKNERIQDR NSVDLDEDSK EQLDLNCHPD RENDLVEAAG 600 MSLATLIKDA DIPSEAGLQK NEIPSSEPDL LSRTASESCE HIADEGGILS GNVVQENKSE 660 DGESGTGLN*

Sequence ? help Back to Top

Protein Sequence Length: 670 aa Download sequence

MGSKICMNEV CRATTSSVWK KGXLNFVEMG SKICMNEVCR ATTSSVWKKG WVLNSGGFAT  60
LCYNCGSAYE NSVYCETFHR DESGWRQCAK CGKGIHCGCI ASRYSHEYLD FGGVGCINCV  120
KSSEIHSVQS MQVLSASDAG RIGRLVLPKA CAEAYFPSIN QSEGIPIRIQ DIKGKEWTFQ  180
FRFWPNNNSR MYVLEGVTPC IQNMQVQAGD TVTFSRIDPG GQLVIGCRKA TDNVDTQDTQ  240
TPLLPNDDSP GETSFSGPTD NPLSVSFNKN ILLIEMLLNG AKTSDDSMQQ HKPVSEKKKT  300
RNMKNKRLLM HSEDAMELRI TWEEAQELLR PPPTVQPTIV TIEDHAFEEY DEPPVFGKRT  360
IFTSQPSGEQ EQLAQCDSCS KWRRLPVHVL LPAKWTCSEN LWDSNRSSCS IPEDINSSDM  420
SASFRVCKES KRRRSADNKA SKDGEPSGLD ALATAAVLGD NMDDLAESLV GATTKHPRHR  480
PGCTCIVCIQ PPSGKGKHEP TCECNVCLTV KRRFKTLMLR KKQRQSELAA ELALGKDEAQ  540
VDVKLENDDD IAGQALLQMN LPKNERIQDR NSVDLDEDSK EQLDLNCHPD RENDLVEAAG  600
MSLATLIKDA DIPSEAGLQK NEIPSSEPDL LSRTASESCE HIADEGGILS GNVVQENKSE  660
DGESGTGLN*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	511	522	KRRFKTLMLRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30470.1	1e-161	B3 family protein