PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu064681.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB_related

Protein Properties

Length: 499aa MW: 56372.8 Da PI: 8.853

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu064681.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	37.5	5.3e-12	446	494	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT....TTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg....kgRtlkqcksrwqk 46 g+W++eE++ l +v+++G g+Wk I + +Rt+ ++k++w++ Oeu064681.2 446 GKWSAEEEDTLRAGVEEYGQGNWKCILKAYRhifeGRRTEVDLKDKWRN 494 79**********************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 499 aa Download sequence
MDIDPDISNW ILEFLLKQPL QDSILNFLVS NLPLPNNNPI LKKSLLLKKL EFEISHNSAV 60 SETTLEHLEQ LEELESRKGV ERVSDAMKCA YWQIAVECSV KYLKKEVWKK SKYDFFKSLK 120 SVWWGRVGKL EKVENGGLGS EELFAWRDEM DNAFPKKRAR KRLVKKSKGV NAVEALRVYL 180 KEEREKMGPS FLELVAHRFK DEETMKEVLG LGNANGIVPN EPVLRSADQD SAAKNNNGVV 240 QKDASLQRSS DTFRGAEVVD SDCLAVQPLL CKYDLPPTPE VTRVQEALES SRLDLQANVK 300 DPLPDALRRA EVITGKERGS TDHEPIKENH VSPNPSAVNG AGVITGKERG STDHEPIQEN 360 HVSPNPSAVN GVVRTDGGNP SNRPRPSLME RNSTAHTHEW DESNVNSLED STDRVSRPKL 420 PSPKRRLVSP LKKTGKGQTT KRRRVGKWSA EEEDTLRAGV EEYGQGNWKC ILKAYRHIFE 480 GRRTEVDLKD KWRNMNRY*

Sequence ? help Back to Top

Protein Sequence Length: 499 aa Download sequence

MDIDPDISNW ILEFLLKQPL QDSILNFLVS NLPLPNNNPI LKKSLLLKKL EFEISHNSAV  60
SETTLEHLEQ LEELESRKGV ERVSDAMKCA YWQIAVECSV KYLKKEVWKK SKYDFFKSLK  120
SVWWGRVGKL EKVENGGLGS EELFAWRDEM DNAFPKKRAR KRLVKKSKGV NAVEALRVYL  180
KEEREKMGPS FLELVAHRFK DEETMKEVLG LGNANGIVPN EPVLRSADQD SAAKNNNGVV  240
QKDASLQRSS DTFRGAEVVD SDCLAVQPLL CKYDLPPTPE VTRVQEALES SRLDLQANVK  300
DPLPDALRRA EVITGKERGS TDHEPIKENH VSPNPSAVNG AGVITGKERG STDHEPIQEN  360
HVSPNPSAVN GVVRTDGGNP SNRPRPSLME RNSTAHTHEW DESNVNSLED STDRVSRPKL  420
PSPKRRLVSP LKKTGKGQTT KRRRVGKWSA EEEDTLRAGV EEYGQGNWKC ILKAYRHIFE  480
GRRTEVDLKD KWRNMNRY*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	424	444	KRRLVSPLKKTGKGQTTKRRR
2	441	445	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G15720.1	7e-12	MYB_related family protein