PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu063500.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 370aa MW: 39631.5 Da PI: 10.034

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu063500.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	20.5	8.9e-07	290	319	6	37
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS- CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskK 37 +++Er RR ri ++ +L++l+P+ + ++kK Oeu063500.1 290 SIAERERRTRISGKLKKLQDLVPNmD---KKKK 319 689*********************77...7776 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MYPSSTSSSS QGSMGPSGSG GTGSSGLMRY GSAPGSLLTA AVDSVVGRGR EFSRFFSSDP 60 SESISKDGSN NGGGANNPRE QQNKTAGLQR SYGFNEIATG GGSGGGGGGG VASSSRSTLI 120 RHSSSPAGFL NQLATAAGDN GFSITRGIRS YDPKEVSDNG RGITRLNSQL SFTRPETLSR 180 ISEENENVVD VINMNNGQRK STHSYTNAGF GMGTWDDDNA IMFSAPPTKR AKNISSEVVN 240 DLNTIESQFH FSISETALEM AAMDKLLHIP EDSVPCKIRA KRGCATHPRS IAERERRTRI 300 SGKLKKLQDL VPNMDKKKKV GQILGIITAM DLILVKRQAF IPDLRVDFKR MCHCSKLAML 360 ICWIWQFNT*

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MYPSSTSSSS QGSMGPSGSG GTGSSGLMRY GSAPGSLLTA AVDSVVGRGR EFSRFFSSDP  60
SESISKDGSN NGGGANNPRE QQNKTAGLQR SYGFNEIATG GGSGGGGGGG VASSSRSTLI  120
RHSSSPAGFL NQLATAAGDN GFSITRGIRS YDPKEVSDNG RGITRLNSQL SFTRPETLSR  180
ISEENENVVD VINMNNGQRK STHSYTNAGF GMGTWDDDNA IMFSAPPTKR AKNISSEVVN  240
DLNTIESQFH FSISETALEM AAMDKLLHIP EDSVPCKIRA KRGCATHPRS IAERERRTRI  300
SGKLKKLQDL VPNMDKKKKV GQILGIITAM DLILVKRQAF IPDLRVDFKR MCHCSKLAML  360
ICWIWQFNT*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G05805.1	4e-58	bHLH family protein