PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu063324.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NF-YA
Protein Properties Length: 311aa    MW: 34102.7 Da    PI: 8.622
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu063324.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.83.2e-32164220158
    CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                  +ep+YVNaKQy++Il+RRq+Rak+e ekkl +k rkpylheSRh+hAlrR+RgsgGrF
  Oeu063324.1 164 QEPVYVNAKQYNGILRRRQMRAKAELEKKL-IKVRKPYLHESRHQHALRRARGSGGRF 220
                  69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MQSNCKRVNP GESNLYNVSK PRVRSEPWGS DTGYKPSPAA MMQGNTSDSS SLEQSVDGQS  60
QSEGGMNEED DAAVKQTSST LPLNPDRNHG DDDQNQFAPT VQPRIESLVQ PPQLELVGHS  120
IACASNPYDP YYGGMMAAYG QPLVPPHLFD MHPARMPLPL EMEQEPVYVN AKQYNGILRR  180
RQMRAKAELE KKLIKVRKPY LHESRHQHAL RRARGSGGRF TKKSDAATSN GADSGSTVSP  240
QSINSSASKA LPPESNEANV PAVQHAHNND VRNFRNQTNK QEQAYQSTGE GHPSGQQWGN  300
IPSNRAFAMK *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.13e-62NF-YA family protein