PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu063080.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | ERF | ||||||||
Protein Properties | Length: 224aa MW: 24911.7 Da PI: 5.1825 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.6 | 3e-18 | 136 | 186 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g++ AeIrdp+ r++lg+++t +Aa+a++ a+ k++g Oeu063080.1 136 RYRGVRRRP-WGKYSAEIRDPTRK--GSRVWLGTYDTDIDAARAYDCAAFKMRG 186 7********.**********8542..4*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MTTQEPNESL TLELISPQFL EDFTFTESFL QSLNLCFSDV FYDDQFSGPE KLASPASFSD 60 SKQPNSIFST CFKTEPDFFE IEMKPQIIEN SSLGAQDSVS STSPPPPTEP AKTHPEEICF 120 VHGSGEITSS IEAGRRYRGV RRRPWGKYSA EIRDPTRKGS RVWLGTYDTD IDAARAYDCA 180 AFKMRGSKAI LNFPSNAGKS DPPEKTGRKR RRVETKPDST SPV* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 208 | 212 | RKRRR |
2 | 209 | 213 | KRRRV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G07580.1 | 7e-34 | ERF family protein |