PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu062666.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family BBR-BPC
Protein Properties Length: 285aa    MW: 31788.3 Da    PI: 9.7171
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu062666.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind321.23.2e-9812841301
    GAGA_bind   1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki....rernlalsekkaavaerd..........maflqrdkalaernkalverdnkllal 84 
                  mdddg + rn+gyye+   lk +lglqlmss++e+d+k+    +++ + +    +++ +rd           ++  rd+++++        ++k+l++
  Oeu062666.1   1 MDDDGLNMRNWGYYEQP-PLKGHLGLQLMSSLTEQDTKPllfgHDNPV-IVPATGVFRPRDfafteppvthLDY-VRDTWINH--------RDKFLHM 87 
                  9*****99*******99.9**********************9777777.99999*******6666666555555.56666666........7899999 PP

    GAGA_bind  85 llvenslasalpvgvqvlsgtk.sidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkke 181
                   + +         + +vl + + + +s+q+l++      +  ++e+e      iee  +++k+  + kkr+ a + k++kakk +k +++ k++ +++
  Oeu062666.1  88 FPGSV--------YNSVLAEPSgTQNSMQMLNQ------PDTTKETE----VSIEE-SSVQKDYGRGKKRSVAITDKSPKAKKSRKGPPAGKENGNSS 166
                  98333........33334443303445566332......22222222....33333.34455556666677888889999999999888888888887 PP

    GAGA_bind 182 saderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydl 279
                     +r++  kk++d+v+ng ++D+s + +PvCsCtG+++qCY+WG+GGWqSaCCtttiS+yPLP+stkrrgaRiagrKmSqgafkk+LekLaaeGy++
  Oeu062666.1 167 V--QRARIAKKNMDIVINGFDMDISDISIPVCSCTGTPQQCYRWGCGGWQSACCTTTISMYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAAEGYNF 262
                  7..79********************************************************************************************* PP

    GAGA_bind 280 snpvDLkdhWAkHGtnkfvtir 301
                  snp+DLk++WAkHGtnkfv ir
  Oeu062666.1 263 SNPIDLKTYWAKHGTNKFVIIR 284
                  ********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MDDDGLNMRN WGYYEQPPLK GHLGLQLMSS LTEQDTKPLL FGHDNPVIVP ATGVFRPRDF  60
AFTEPPVTHL DYVRDTWINH RDKFLHMFPG SVYNSVLAEP SGTQNSMQML NQPDTTKETE  120
VSIEESSVQK DYGRGKKRSV AITDKSPKAK KSRKGPPAGK ENGNSSVQRA RIAKKNMDIV  180
INGFDMDISD ISIPVCSCTG TPQQCYRWGC GGWQSACCTT TISMYPLPMS TKRRGARIAG  240
RKMSQGAFKK VLEKLAAEGY NFSNPIDLKT YWAKHGTNKF VIIR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01930.13e-94BBR-BPC family protein