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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu062507.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 227aa MW: 25476.6 Da PI: 7.8243 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 50.3 | 1e-15 | 10 | 79 | 26 | 95 |
GAGA_bind 26 lqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvenslasal 95 + m++ aerda+irern+al e+k a+aerdma lqrd+a+aer +a+ +rd++++a +++e++ + Oeu062507.1 10 KTFMAITAERDAAIRERNMALEERKRAFAERDMAMLQRDAAIAERSAAIQDRDEAIAAFQFRETKPLRVG 79 35789999*****************************************************999765444 PP | |||||||
2 | GAGA_bind | 234.6 | 7.2e-72 | 84 | 226 | 158 | 301 |
GAGA_bind 158 kpkekkakkkkkksekskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRi 255 ++++k+ ++ +s +++++ + +++d +++ ++k +l+ln++++Des++PvPvCsCtG+++ CY+WG+GGWqSaCCtttiS+yPLP+++++r +R+ Oeu062507.1 84 ENLSKQVNSDASNSWSNEHDFDCDEDDLDKQVSWK-DNLGLNQINFDESAMPVPVCSCTGSPQPCYRWGSGGWQSACCTTTISMYPLPQVANKRYTRV 180 33333333333323333333333443344666666.58************************************************************ PP GAGA_bind 256 agrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301 +grKmS++af klL++La++Gyd+s+p+DLkdhWAkHGtn++ t++ Oeu062507.1 181 GGRKMSGSAFGKLLNRLATDGYDFSTPLDLKDHWAKHGTNRYSTLK 226 ******************************************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MKDHNHLTIK TFMAITAERD AAIRERNMAL EERKRAFAER DMAMLQRDAA IAERSAAIQD 60 RDEAIAAFQF RETKPLRVGK RGAENLSKQV NSDASNSWSN EHDFDCDEDD LDKQVSWKDN 120 LGLNQINFDE SAMPVPVCSC TGSPQPCYRW GSGGWQSACC TTTISMYPLP QVANKRYTRV 180 GGRKMSGSAF GKLLNRLATD GYDFSTPLDL KDHWAKHGTN RYSTLK* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G21240.1 | 6e-72 | BBR-BPC family protein |