PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu062332.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 289aa MW: 32820.3 Da PI: 7.5005

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu062332.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	104.1	2.2e-32	34	144	3	106
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg......kaaks 93 g+kdrhsk++T +g + RRvRls ++a++f+dLqd+LG+d++sk+++WL+++ak ai++l ++++ +a+++ ++ +++ a+++ ++ k ++s Oeu062332.1 34 GRKDRHSKVCTTRGTKERRVRLSPNTAIQFYDLQDRLGYDRPSKALDWLMKKAKSAIDALDQSDNHNAENVmQSCDHQADAGFQDHSqkdtirKDNPS 131 89*************************************************************88888554433333333332222212244433333 PP TCP 94 aakskksqksaas 106 ++ ++++ks+++ Oeu062332.1 132 YHQDHFNSKSKTH 144 3333333333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 289 aa Download sequence
MQEGFHQGSS KLKLKRRKRE VIDVHGGRIV RSMGRKDRHS KVCTTRGTKE RRVRLSPNTA 60 IQFYDLQDRL GYDRPSKALD WLMKKAKSAI DALDQSDNHN AENVMQSCDH QADAGFQDHS 120 QKDTIRKDNP SYHQDHFNSK SKTHGQSLHC SSQYLWDDSI IISGYEQGQL SVSTTSHLDS 180 DLEMAAISRH FSWIHDSVNS GQFFSQREPL QSSICPHINH ALSSTQFRSV SLPGNEMSNF 240 FAEPREVEEK ESNSNFLKPS SCTPFSHYED LVDGSPLPTQ YVLLNHLT*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G53230.1	3e-35	TCP family protein