PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu062125.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 275aa MW: 30935 Da PI: 8.6347

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu062125.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	54.5	2e-17	76	128	4	56
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + +++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rq+ +WFqNrRa++k Oeu062125.1 76 KKRLKLEQVKALEKSFELGNKLEPERKMKLARALGLQPRQIAIWFQNRRARWK 128 4557889*********************************************9 PP
2	HD-ZIP_I/II	124.2	6e-40	74	165	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekk+rl+ eqvk+LE+sFe +kLeperK++lar+Lglqprq+a+WFqnrRAR+ktk++Ekdy+ Lk +++alk++n++L++++++L++el+ Oeu062125.1 74 EKKKRLKLEQVKALEKSFELGNKLEPERKMKLARALGLQPRQIAIWFQNRRARWKTKRIEKDYDILKGQFQALKADNANLKNQNKKLQSELM 165 69**************************************************************************************9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 275 aa Download sequence
MAFVPAAESM FPSHEDGHLP SITRGGFSMS CDPQDFHGVS QFLMRRSTSF SGLNRSEEVP 60 VDDDMSDDGL HLGEKKKRLK LEQVKALEKS FELGNKLEPE RKMKLARALG LQPRQIAIWF 120 QNRRARWKTK RIEKDYDILK GQFQALKADN ANLKNQNKKL QSELMVLKNG ESTRPINLNK 180 ENECIWSNGS ENGCDINLVA TKATPADSKL YSHPSNKLNS SSSMGPKSLT QLLLQSSSRA 240 PDLHQGHKIS TSDAFCNMFS SIEENPDFWA WPEH*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	75	104	KKKRLKLEQVKALEKSFELGNKLEPERKMK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01220.1	5e-60	HD-ZIP family protein