PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu062108.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

ZF-HD

Protein Properties

Length: 361aa MW: 38951 Da PI: 8.2586

Description

ZF-HD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu062108.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	ZF-HD_dimer	111.7	3.7e-35	60	117	3	59
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 v+YkeClkNhAas+GghavDGCgEfmp+++++ +++++lkCaACgCHRnFHRre+e+ Oeu062108.1 60 VVNYKECLKNHAASMGGHAVDGCGEFMPAPTANpSEPTSLKCAACGCHRNFHRREPED 117 589****************************9******************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MDLSNSTATA TVKTPEAENE TPTRIQTTNS KPLSLTNGVL KRPPPLQLYP GNFNNHHPVV 60 VNYKECLKNH AASMGGHAVD GCGEFMPAPT ANPSEPTSLK CAACGCHRNF HRREPEDPLP 120 PNATPALEFQ PHHRHHPPPP PLANRGNCSS PNSPSPPPIS SSYYPSAPHM LLALSHGPSG 180 PPPDSNTPIS TTPNSTSAPL SSNPNGRKRF RTRFTQDQKE KMLQFAERVG WKMQKRDEDA 240 ITEFCTEIGV DKGVFKVWMH NNKTTFGKRD QHIANSVISP TAPATNNGNG NGISYGTISS 300 RNNTFDTAAA TTSVQYHHHQ DSNNDCKINI GGQDLSQHHL HDNNGNSPHV LGTNGSSSSS 360 *

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MDLSNSTATA TVKTPEAENE TPTRIQTTNS KPLSLTNGVL KRPPPLQLYP GNFNNHHPVV  60
VNYKECLKNH AASMGGHAVD GCGEFMPAPT ANPSEPTSLK CAACGCHRNF HRREPEDPLP  120
PNATPALEFQ PHHRHHPPPP PLANRGNCSS PNSPSPPPIS SSYYPSAPHM LLALSHGPSG  180
PPPDSNTPIS TTPNSTSAPL SSNPNGRKRF RTRFTQDQKE KMLQFAERVG WKMQKRDEDA  240
ITEFCTEIGV DKGVFKVWMH NNKTTFGKRD QHIANSVISP TAPATNNGNG NGISYGTISS  300
RNNTFDTAAA TTSVQYHHHQ DSNNDCKINI GGQDLSQHHL HDNNGNSPHV LGTNGSSSSS  360
*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G28920.1	4e-66	ZF-HD family protein