PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu061910.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 414aa MW: 46071.4 Da PI: 7.6142

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu061910.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.2	7.7e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l++ ++++G g+W+++++ g+ R++k+c++rw +yl Oeu061910.1 14 KGLWSPEEDEKLIKHITKYGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	43.8	6e-14	67	109	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg ++ eE+ l++++++ lG++ W+ Ia+ ++ gRt++++k+ w+ Oeu061910.1 67 RGTFSLEEENLIIELHAVLGNR-WSQIAAQLP-GRTDNEIKNLWN 109 899*****************.*****.*******998 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MGRHSCCYKQ KLRKGLWSPE EDEKLIKHIT KYGHGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGTF SLEEENLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS SIKKKLRQRG 120 IDPNTHKPIS EVENEEKASP SSKNNEKASE GISELTLVDS GNSRKINSSL DHYPLIQNNS 180 SNLAPTHEFF MNKFVASHES STTDNKPSDL SEYVSFQQLN YSPNNIGLSM NPNTSNLLFN 240 PNSKSSGIES EFNSCVTNTV LPSLPSSFLS FSTRLKSSTS LPPDSPIGLL STKFQNWDGC 300 SLGNNGSTIN VTSSNSSIFA HVPSSEHEIP EDMKWSEYLH TPLILGNNLQ NQSAQDLFGE 360 TKSRTQVSTE GSLTSTSNWH QNQQLQNLQA ADMSASIFRG FLPPVDNFLS LLH*

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MGRHSCCYKQ KLRKGLWSPE EDEKLIKHIT KYGHGCWSSV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGTF SLEEENLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS SIKKKLRQRG  120
IDPNTHKPIS EVENEEKASP SSKNNEKASE GISELTLVDS GNSRKINSSL DHYPLIQNNS  180
SNLAPTHEFF MNKFVASHES STTDNKPSDL SEYVSFQQLN YSPNNIGLSM NPNTSNLLFN  240
PNSKSSGIES EFNSCVTNTV LPSLPSSFLS FSTRLKSSTS LPPDSPIGLL STKFQNWDGC  300
SLGNNGSTIN VTSSNSSIFA HVPSSEHEIP EDMKWSEYLH TPLILGNNLQ NQSAQDLFGE  360
TKSRTQVSTE GSLTSTSNWH QNQQLQNLQA ADMSASIFRG FLPPVDNFLS LLH*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09540.1	1e-103	MYB family protein