PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu061710.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

SRS

Protein Properties

Length: 359aa MW: 37393.1 Da PI: 8.286

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu061710.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	206.9	5.5e-64	143	302	3	154
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskkel 100 sg+++CqdCGnqakkdC+ +RCRtCC++rg+dCath+kstWvpaa+rrer +++a+a+ +a +s++++ +k++r ++ ++++s+t++s++++++++ Oeu061710.1 143 SGATTCQDCGNQAKKDCSRQRCRTCCRTRGYDCATHLKSTWVPAARRRERLAMAATAA-TAGSSQSTSGAKKPRLG-TSLTTTASHTSTSNNTPPRSF 238 7889********************************************99888764.55566777888888875.7888999999******* PP DUF702 101 etss..........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 +tss +P +v+++avf+cv+v++vddg++e+aYq++ igGhvfkG+LydqG+e+ Oeu061710.1 239 DTSSshqgasfkepFPGQVRAPAVFKCVKVTAVDDGDDEYAYQAVTRIGGHVFKGFLYDQGVES 302 999********************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MWPSSTTTRH VNYGLPPEFF VVAPASFHHN TQHHHHPEAA AATTINFDHH GINASNAAAA 60 IGVGVIPLLT AAPCLNMGST DEDLSINVRN RSGSGMQLWQ NQQVQNTSAY SKKHMIQDHN 120 ILLQTGRGGS SCGGGDGIGG SSSGATTCQD CGNQAKKDCS RQRCRTCCRT RGYDCATHLK 180 STWVPAARRR ERLAMAATAA TAGSSQSTSG AKKPRLGTSL TTTASHTSTS NNTPPRSFDT 240 SSSHQGASFK EPFPGQVRAP AVFKCVKVTA VDDGDDEYAY QAVTRIGGHV FKGFLYDQGV 300 ESRDGFPNIS DLHLGGSSGG GGEGRHGASS SSPVLDASDV YASGGGLLGG SNYGIPIN*

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MWPSSTTTRH VNYGLPPEFF VVAPASFHHN TQHHHHPEAA AATTINFDHH GINASNAAAA  60
IGVGVIPLLT AAPCLNMGST DEDLSINVRN RSGSGMQLWQ NQQVQNTSAY SKKHMIQDHN  120
ILLQTGRGGS SCGGGDGIGG SSSGATTCQD CGNQAKKDCS RQRCRTCCRT RGYDCATHLK  180
STWVPAARRR ERLAMAATAA TAGSSQSTSG AKKPRLGTSL TTTASHTSTS NNTPPRSFDT  240
SSSHQGASFK EPFPGQVRAP AVFKCVKVTA VDDGDDEYAY QAVTRIGGHV FKGFLYDQGV  300
ESRDGFPNIS DLHLGGSSGG GGEGRHGASS SSPVLDASDV YASGGGLLGG SNYGIPIN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12330.1	2e-48	SRS family protein