PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu061323.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family HB-other
Protein Properties Length: 338aa    MW: 37248 Da    PI: 7.7982
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu061323.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox21.34.6e-0710522254
                 SSS--HHHHHHHHHHC..........TS-HHHHHHHHHHHHHH CS
     Homeobox 22 nrypsaeereeLAkkl..........gLterqVkvWFqNrRak 54
                 +  p +e  e LA+k           ++t +qV +WFqNrR+ 
  Oeu061323.1 10 CAVPAREILEALAQKFsasaersgvvEVTVKQVWNWFQNRRYA 52
                 56688999999999999999999999***************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MEAILQAHNC AVPAREILEA LAQKFSASAE RSGVVEVTVK QVWNWFQNRR YAVRAKASKT  60
TVPAQMNMPQ EDHTAARIAP QTPQTQPAPS GSIELSYVKN LLNLFFTVID IKQAIQAPVK  120
SMPQVPHPIT APSGQSAGKT ASDNSQLEFE AKSARDGAWY DVATFLSHRS LETGDPEVLV  180
RFSGFGPEED EWVNVLKNVR QRSLPCESSE CAAVLQGDLI LCFQEGKEQA LYFDARVLDA  240
QRRRHDVRGC RCRFLVRYEH DQSEEIVPLR KICRRPETDY RLQQLHSGSA TVNAQKTGSD  300
PRPGNSSVVN ASSATTQKLP TPVPTGESEA PTLPKIA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18380.11e-108HB-other family protein