PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu061198.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB_related

Protein Properties

Length: 453aa MW: 50562.5 Da PI: 6.7516

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu061198.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.4	2.2e-15	44	88	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE++++++a k++G W+ I + +g ++++ q++s+ qk+ Oeu061198.1 44 RERWTEEEHQRFIEALKLYGRA-WRQIEEFVG-TKSAIQIRSHAQKF 88 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
MVAESQDKGG VTSQEGSETQ NILAGNGNGY LPKVRKPYTI TKQRERWTEE EHQRFIEALK 60 LYGRAWRQIE EFVGTKSAIQ IRSHAQKFFA KVNRDSSNDA EGYVNPIEIP PPRPKKKPLH 120 PYPRKIVISS KTESMVSHQP EITPIPYTLA TERDNLSLTS VLSVIRSVAF ESTEVHTSRL 180 SPASCATDAH SANLLSTEND NEYVEFSLAA EDKDVHLSFQ ISSASVPDNK SAMNFELFSQ 240 DTACSIEHPA TGEPHASIKL FGKTVVVRDT PKQSLAVGEN SKSLPPYAID ENYDGNSEKH 300 IHGFTSDNLN SRVAFGFVSN SATPPRCLPQ HSLSNMYFNT ENHSSLPLWV YHKGLVYPYV 360 SSCIRIGAEN AVDSPLREEL KNEELQMKRT SADSDGRLII EVNSECDSFE SKRKEKYKKG 420 FEPYKRCVAE RDVNSSISVL EERAGQRARV CS*

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

MVAESQDKGG VTSQEGSETQ NILAGNGNGY LPKVRKPYTI TKQRERWTEE EHQRFIEALK  60
LYGRAWRQIE EFVGTKSAIQ IRSHAQKFFA KVNRDSSNDA EGYVNPIEIP PPRPKKKPLH  120
PYPRKIVISS KTESMVSHQP EITPIPYTLA TERDNLSLTS VLSVIRSVAF ESTEVHTSRL  180
SPASCATDAH SANLLSTEND NEYVEFSLAA EDKDVHLSFQ ISSASVPDNK SAMNFELFSQ  240
DTACSIEHPA TGEPHASIKL FGKTVVVRDT PKQSLAVGEN SKSLPPYAID ENYDGNSEKH  300
IHGFTSDNLN SRVAFGFVSN SATPPRCLPQ HSLSNMYFNT ENHSSLPLWV YHKGLVYPYV  360
SSCIRIGAEN AVDSPLREEL KNEELQMKRT SADSDGRLII EVNSECDSFE SKRKEKYKKG  420
FEPYKRCVAE RDVNSSISVL EERAGQRARV CS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17300.1	4e-38	MYB_related family protein