PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu061162.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 508aa MW: 56939.3 Da PI: 8.7621

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu061162.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.5	3.6e-16	222	269	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++hn+ ErrRRdriN+++ L++l+P+a K +Ka++L +++ Y+k+Lq Oeu061162.1 222 ATHNQSERRRRDRINQKMKALQKLVPNA-----SKTDKASMLDEVIAYLKQLQ 269 69***********************9.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 508 aa Download sequence
MNHCVVPKWN RRHQRQEQVD EEGKTSRDHV PIKQKTNFCG TLEFRSSNEV AELTWENGQL 60 AMHDLGSMVP SPIRASTSAD TLECLVDQAT RDRSNKKEAT FSSLDAPWGH MAASSSCHVG 120 PAGLTKKRTR SESEQNCGRY FEEDQGGEAS GCASASATFC MDTDTTMMTW ASFEPPQSFK 180 STRNRDEDSA FPACSEKQDE ERENNWDATQ SPSSGRHSRA AATHNQSERR RRDRINQKMK 240 ALQKLVPNAS KTDKASMLDE VIAYLKQLQA QVQMMSARTN IPQMMMPLGI QQQLQMSLLA 300 RMGMGMGMLG MNNVARTMPQ LFPSYIHSPP LSVAAPPFVP PPPFSMPQTI SPPTPSNTSL 360 PFNDAYYTFL AQQSMNMDFY KKMEALYQQH LNQSAQKPVS SSQANNSHIE QYMEQGCPPR 420 HSLVVQRTEV RLSYALLTTA VWRAHPAIYL PHKALETGRW GPSRLGFNLN IWNKEKKRAT 480 NSEFQGGILN NLGLKVQLDK GSNFIMH*

Sequence ? help Back to Top

Protein Sequence Length: 508 aa Download sequence

MNHCVVPKWN RRHQRQEQVD EEGKTSRDHV PIKQKTNFCG TLEFRSSNEV AELTWENGQL  60
AMHDLGSMVP SPIRASTSAD TLECLVDQAT RDRSNKKEAT FSSLDAPWGH MAASSSCHVG  120
PAGLTKKRTR SESEQNCGRY FEEDQGGEAS GCASASATFC MDTDTTMMTW ASFEPPQSFK  180
STRNRDEDSA FPACSEKQDE ERENNWDATQ SPSSGRHSRA AATHNQSERR RRDRINQKMK  240
ALQKLVPNAS KTDKASMLDE VIAYLKQLQA QVQMMSARTN IPQMMMPLGI QQQLQMSLLA  300
RMGMGMGMLG MNNVARTMPQ LFPSYIHSPP LSVAAPPFVP PPPFSMPQTI SPPTPSNTSL  360
PFNDAYYTFL AQQSMNMDFY KKMEALYQQH LNQSAQKPVS SSQANNSHIE QYMEQGCPPR  420
HSLVVQRTEV RLSYALLTTA VWRAHPAIYL PHKALETGRW GPSRLGFNLN IWNKEKKRAT  480
NSEFQGGILN NLGLKVQLDK GSNFIMH*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	228	233	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	4e-37	bHLH family protein