PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Oeu060962.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 141aa MW: 15751.3 Da PI: 6.6826 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 67.3 | 3e-21 | 11 | 62 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y+G+r+++ +g+++AeIrdp+ ng +r +lg+f+taeeAa+a+++a+ +l+g+ Oeu060962.1 11 KYRGIRRRP-WGKYAAEIRDPKRNG--ARLWLGTFDTAEEAARAYDKAAYALRGH 62 8********.**********98776..**************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 141 aa Download sequence |
MEDHKEQKEV KYRGIRRRPW GKYAAEIRDP KRNGARLWLG TFDTAEEAAR AYDKAAYALR 60 GHQAILNFPN DDHYRSAGLP PSISYSSSSS SSSSSTSSSA PLCDENLAVE GSSKGHGEQV 120 IFEFEYLDNK LLEDLLDRHK * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G23230.1 | 3e-29 | ERF family protein |