PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu060945.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | LBD | ||||||||
Protein Properties | Length: 230aa MW: 25277.1 Da PI: 5.9239 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 125.3 | 3.1e-39 | 7 | 107 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelall 97 +C aCk+lrrkC+++Cv+apyf +eq +++fa++hk+FGasnv+kll++lp ++r +a+ ++ yeA+ar++dP+yG+v++i++lqqq+ l+a+la+l Oeu060945.1 7 PCGACKFLRRKCVRGCVFAPYFSHEQgAAHFAAIHKVFGASNVSKLLAHLPMSDRCEAAVTISYEAQARVQDPIYGCVSHIFALQQQVVDLQAQLASL 104 7*************************89*******************************************************************998 PP DUF260 98 kee 100 + + Oeu060945.1 105 RGQ 107 865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MKGSGSPCGA CKFLRRKCVR GCVFAPYFSH EQGAAHFAAI HKVFGASNVS KLLAHLPMSD 60 RCEAAVTISY EAQARVQDPI YGCVSHIFAL QQQVVDLQAQ LASLRGQAAQ SILNSSKNGN 120 PNEKFYCGTN SFSRDVKSWF QSSQNQGLVP QLDVNSSSTN IREMASCYEN CTVNDLNRVG 180 NYENSALVEE NTSFGSMDSL EMQSNETEWP FQDDGDDLQS VTFRYVQHS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58190.1 | 4e-59 | LBD family protein |