PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu060803.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 363aa MW: 39254.6 Da PI: 7.8494

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu060803.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	131	1.2e-40	72	183	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg.......... 88 ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s + Oeu060803.1 72 PPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSISVPsqlrstyfnp 169 789******************************************************************99987777777777555554444444444 PP TCP 89 .............k 89 Oeu060803.1 170 nfsmqqrrglfpgL 183 44444444444441 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MEGLGDDHLQ DNRRPNFPFQ LLEKREDETG CSTSSVYSSL AISADASNLS IITRSTAAST 60 GLDTAEPSKK PPPKRTSTKD RHTKVDGRGR RIRMPALCAA RVFQLTRELG HKTDGETIEW 120 LLQQAEPAVI AATGTGTIPA NFTSLNISLR SSGSSISVPS QLRSTYFNPN FSMQQRRGLF 180 PGLSSENSLT TLLNFQAGNL NPSLMQAKQE INQHSLHLKE AEDSLGRKRR VEQELQPLHH 240 HQMGTYLLQS TTGSMPANHA SVPSNFWMIP NSSNQVMGGD PTYNSAAALY RGTMSSGLNF 300 MNFPTAVALL PNQQLSTGGL GEGQLGLAGL NPYRSGDEVS ESQVRGSHGG GDDRHETTSH 360 HS*

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MEGLGDDHLQ DNRRPNFPFQ LLEKREDETG CSTSSVYSSL AISADASNLS IITRSTAAST  60
GLDTAEPSKK PPPKRTSTKD RHTKVDGRGR RIRMPALCAA RVFQLTRELG HKTDGETIEW  120
LLQQAEPAVI AATGTGTIPA NFTSLNISLR SSGSSISVPS QLRSTYFNPN FSMQQRRGLF  180
PGLSSENSLT TLLNFQAGNL NPSLMQAKQE INQHSLHLKE AEDSLGRKRR VEQELQPLHH  240
HQMGTYLLQS TTGSMPANHA SVPSNFWMIP NSSNQVMGGD PTYNSAAALY RGTMSSGLNF  300
MNFPTAVALL PNQQLSTGGL GEGQLGLAGL NPYRSGDEVS ESQVRGSHGG GDDRHETTSH  360
HS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	1e-42	TCP family protein