PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu060760.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 428aa MW: 49250.3 Da PI: 8.7111

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu060760.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.5	5.6e-06	62	82	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C+ Cg sF + +Lk+H+++H Oeu060760.2 62 CEECGASFQKPAHLKQHMQSH 82 *******************99 PP
2	zf-C2H2	17.9	8.8e-06	150	174	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++Cp dC+ s++rk++L+rH+ H Oeu060760.2 150 FTCPvdDCHSSYRRKDHLTRHLLQH 174 89*******************9887 PP
3	zf-C2H2	15.1	6.7e-05	179	204	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 ++Cp C+ +F + nLkrH++ H Oeu060760.2 179 FECPveACKHRFAFQGNLKRHMNEfH 204 899999****************9988 PP
4	zf-C2H2	16.9	1.8e-05	218	242	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++C+ Cgk+F+ s L++H +H Oeu060760.2 218 HVCQeiGCGKVFKFLSKLRKHEESH 242 79*******************9988 PP
5	zf-C2H2	18.1	7.2e-06	309	333	2	23
EET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirt.H 23 kC+ C ++Fs+ksnL+ Hi+ H Oeu060760.2 309 KCSfeGCLRTFSTKSNLNLHIKAvH 333 688889***************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MENEVGRGPI FIDIRRYYCQ YCGLCRSKKS LISSHILSQH QEEVKEKEQN GEKMESKKTN 60 ICEECGASFQ KPAHLKQHMQ SHSLENSKMR GRQYFLNGLV SGGGPPEKPH QVSLDHAYSS 120 SRFENCSSLS MEVEVPYLLK VSYTTVLRPF TCPVDDCHSS YRRKDHLTRH LLQHQGKLFE 180 CPVEACKHRF AFQGNLKRHM NEFHDSSAST SVEDPKEHVC QEIGCGKVFK FLSKLRKHEE 240 SHVKLDTVEA FCSEPGCMKY FTNAQCLKQH LWSCHRRIVC EICGTKQLKK NMKRHLRMHE 300 SGISSERIKC SFEGCLRTFS TKSNLNLHIK AVHCELKPFS CSIPGCGMKF AFKHVRDNHE 360 KSGCHVYSQG NFEESDEQFR LRPRGGRKRT SPEIETLMRK RVVPPSESDL IRREGPEYLS 420 WLLSGDS*

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MENEVGRGPI FIDIRRYYCQ YCGLCRSKKS LISSHILSQH QEEVKEKEQN GEKMESKKTN  60
ICEECGASFQ KPAHLKQHMQ SHSLENSKMR GRQYFLNGLV SGGGPPEKPH QVSLDHAYSS  120
SRFENCSSLS MEVEVPYLLK VSYTTVLRPF TCPVDDCHSS YRRKDHLTRH LLQHQGKLFE  180
CPVEACKHRF AFQGNLKRHM NEFHDSSAST SVEDPKEHVC QEIGCGKVFK FLSKLRKHEE  240
SHVKLDTVEA FCSEPGCMKY FTNAQCLKQH LWSCHRRIVC EICGTKQLKK NMKRHLRMHE  300
SGISSERIKC SFEGCLRTFS TKSNLNLHIK AVHCELKPFS CSIPGCGMKF AFKHVRDNHE  360
KSGCHVYSQG NFEESDEQFR LRPRGGRKRT SPEIETLMRK RVVPPSESDL IRREGPEYLS  420
WLLSGDS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	288	294	LKKNMKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72050.2	1e-108	C2H2 family protein