PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu060686.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 403aa MW: 45020.2 Da PI: 7.325

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu060686.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.2	7e-09	198	245	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++h Er R +N++f Lr+l+P++ +K + a+++ A+eYI++Lq Oeu060686.1 198 TKHLTTERHKRVLLNDKFMALRSLVPNS-----TKKDRASVVGDAIEYINELQ 245 678889999999*************9.....8****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence
MFFYGGTLKL PSKSPHSTRC CYLHLMQEIV HDSNWQEMSN VNGNMNQYSL PETPYPTTPD 60 LLNMFPLPRC SSSTASLLPN STISFPNSAQ KSPNFLASLG ILGDLNPVDN ALASATVGYD 120 PLLPLNLQQQ PRFLRGLFHS LPHGGHALGG SRTGGSLFPG VMDERDVNGG DGRHFDDGVF 180 DFTGDIDCIS KIRVEKDTKH LTTERHKRVL LNDKFMALRS LVPNSTKKDR ASVVGDAIEY 240 INELQRTVNE LKVLVEKKRC CKERLKRAKI EDDTMEGNID TQSVDDMKQP YNASSLRSSW 300 LHRKSKNSEV DVRIVDDEVT VKLVQQKRIN CLLFVSKVLE ELQLDLHHVA GGLIGDYYSF 360 LFNSKICEGS IVYASAIANK LIEILDKQYS AVPPTTSYYR YA*

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence

MFFYGGTLKL PSKSPHSTRC CYLHLMQEIV HDSNWQEMSN VNGNMNQYSL PETPYPTTPD  60
LLNMFPLPRC SSSTASLLPN STISFPNSAQ KSPNFLASLG ILGDLNPVDN ALASATVGYD  120
PLLPLNLQQQ PRFLRGLFHS LPHGGHALGG SRTGGSLFPG VMDERDVNGG DGRHFDDGVF  180
DFTGDIDCIS KIRVEKDTKH LTTERHKRVL LNDKFMALRS LVPNSTKKDR ASVVGDAIEY  240
INELQRTVNE LKVLVEKKRC CKERLKRAKI EDDTMEGNID TQSVDDMKQP YNASSLRSSW  300
LHRKSKNSEV DVRIVDDEVT VKLVQQKRIN CLLFVSKVLE ELQLDLHHVA GGLIGDYYSF  360
LFNSKICEGS IVYASAIANK LIEILDKQYS AVPPTTSYYR YA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31210.1	2e-72	bHLH family protein